Lactobacillus crispatus: LCRIS_00860
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Entry
LCRIS_00860 CDS
T01222
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03030
DNA replication
lcr03430
Mismatch repair
lcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCRIS_00860 (holA)
03430 Mismatch repair
LCRIS_00860 (holA)
03440 Homologous recombination
LCRIS_00860 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcr03032
]
LCRIS_00860 (holA)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_00860 (holA)
Enzymes [BR:
lcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCRIS_00860 (holA)
DNA replication proteins [BR:
lcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCRIS_00860 (holA)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCRIS_00860 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
CBL50307
UniProt:
D5H2S2
LinkDB
All DBs
Position
862335..863321
Genome browser
AA seq
328 aa
AA seq
DB search
MTLLSLFKNTNNNNPHTLIWGADDFLNDYLVRSYAKEDRFKDLEHVTVDCESDGLDELIA
SLTESSLFSEQKFIVVKNPFFLTAKVSKKLQKQIDDLQKIFENLADLEDVVVIVASYEKI
DRRKKLTKTVLKQFNVVEPQIRPYEVASTTKALIKDEGYIITQSALQLLIERSDQVIDTI
LSNYQKLKMVATDNKITEKSVMQNVDLSLAQNIFAILESALDKNYREAVERLDNQLREGT
NPIQLLAVFENQLELILVVKILAQRGRSEPQIVKELGVHPYRVKLALRNRLKIDKLENLL
RDAIDLEFKYKNGTYREDNFLKLFILNV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaccttactttctttgtttaaaaatacaaataacaataatccacataccttaatttgg
ggtgcagatgactttctcaatgattacttggtgagatcatatgccaaggaagatcgcttt
aaagatttggagcacgtgactgtcgattgcgaaagcgatggcttagatgaattgattgcg
agcttaactgaatccagtttatttagtgaacagaaatttattgtagtcaaaaatcctttc
tttttaacagctaaggtatctaaaaaattacagaaacaaattgatgacttacaaaagatt
tttgaaaacttagctgatttagaagatgtagtagtaattgttgcttcttatgaaaaaatt
gataggcgtaaaaaactgactaaaactgttctaaagcaattcaatgtggttgagccacaa
attaggccctatgaagttgcttcaacgactaaagccttgatcaaagatgagggatatata
atcacacagtcagctttacagctgctaattgagcggagtgatcaggtaattgacactatt
ttaagcaattatcaaaagctaaaaatggtagctaccgataacaaaattactgaaaaatca
gtaatgcaaaatgtagatttgtccctagcacaaaatattttcgctattttggagtcggct
ttagataagaattaccgtgaagcagttgagcgcttagataatcaattacgtgaagggact
aatccaattcaattattagcggtctttgaaaatcaattagaattgattttggtcgttaag
atcttagcacaaagaggtcgtagcgaaccacaaattgtaaaagaattaggcgttcatccc
tatagggttaagttagccctacgtaatcggttgaagatagacaagctagaaaatttatta
agggatgcaatcgacttagaatttaaatataaaaatggaacttaccgagaagataatttt
ttgaaattatttatcttaaatgtctaa
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