Lactobacillus crispatus: LCRIS_01006
Help
Entry
LCRIS_01006 CDS
T01222
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03030
DNA replication
lcr03430
Mismatch repair
lcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCRIS_01006 (dnaE)
03430 Mismatch repair
LCRIS_01006 (dnaE)
03440 Homologous recombination
LCRIS_01006 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcr03032
]
LCRIS_01006 (dnaE)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01006 (dnaE)
Enzymes [BR:
lcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCRIS_01006 (dnaE)
DNA replication proteins [BR:
lcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCRIS_01006 (dnaE)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCRIS_01006 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBL50453
UniProt:
D5H368
LinkDB
All DBs
Position
1012431..1015538
Genome browser
AA seq
1035 aa
AA seq
DB search
MQVAALQNISSFTLLSSPTKVSDLIKDAKEKGYPVVGLADVNVTYGLVNFYELAKKAGIK
PLLGMQLRLNGLVDSTQKYDLLVFAKTNKGYHNLLRLSSAVNLLTENGQNDKVLTLNELT
KYLDDLLIIVPANLKSELMALHDTNQALGSDYVRQLKKLTSDLYLGVYASKASIDYIDYV
RGLAKQFELSLVAVEDSQYLRPREQFLQKTLRAIAKGDKLQDILPLAKQAGSHYLDSAQN
VLECYHQYDLDDAINNTWKIAQKCNAEVIFQKPVLPKYHQDKFPTSEEYLRYLAQTGLQA
RFGQKSIPAEYQKRLNYELRVINQMGFDDYFLIVWDVINYCHRVKITTGPGRGSACGSLV
SYSLRITEVDPIQYNLLFERFLNPARHEMPDIDLDIPDIQRNTVIKYMYQKYGMDHAAQI
LTFGTMAAKQVLRDVGRVFGLTGPEITKWTHAIPYSKDKMELKKAYQESRELRLLVDATP
ENKLLFKTALGLEGLPRHYSIHAAGLVISDDSIAGISGLQAGPFGIPVTQQTKKYVESLG
LLKIDFLGLRNLTVLGNILALVRQQGVKLDPNTIPLNDPKTMELFQQGKTDAVFQFESGG
IRGVLRKLHPDNFEDLVAVNALYRPGPMQNIDAFVARKNGTATVHYPDPSLKQILQSTYG
ILVYQEQVMQTAQILAGFSLGEADILRRAMSKKNQNVIEQERGKFIAGTVKKGHPKEVGE
RVYHYIEQFANYGFNRSHAVAYTKIAFWLAYLKVHYPAAFYTAMLNSSTSAKAQSYSMQA
QEAGVRILPPDINHSQLDYTLQDGKILVGLKAIKGLRLDFAKEIAANTKPYKSFNDFLRR
IDAKFLQVDAIEALIMAGAFDSIEDNRNELLLNCKDVIANVQLTGQNMSLSEILGDAPLK
PAEPPTAAQKAEMEEKALGFTTTTTPLIAVQKYAQKFNARPLNQFQLNDSGISVGKLMKL
KQIRTKNGKTMAFASFADTSSEQEIIIFPPAYEKFGSILKEGDIYLLGVKVQGDRFDQNK
KQYFLTNLRKVNFKE
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagcagcacttcaaaacataagctcctttacgcttttaagtagtccaaccaag
gtaagtgatttgataaaagacgctaaagagaagggctatcctgtggttggtttagccgac
gtgaacgtgacttatggtttggtaaatttttatgagttggctaaaaaggcgggaattaaa
ccacttcttgggatgcaactgcgtttaaatggtttggttgatagcacccaaaaatatgat
ttgctagtttttgccaaaacaaataagggctatcataatttattgcgactttctagcgcg
gtaaatttgttaacggaaaatgggcaaaacgataaggtcttaacgctgaatgaattaacc
aaatatttagatgatttgttgattatcgtaccagctaatctaaaaagtgaattaatggcg
ctgcatgatacaaatcaggcattaggcagtgattatgttcgccaactaaagaagttaacg
tctgatctttatttgggtgtatatgcttcaaaagcaagtatagattacattgattatgtc
cgtggattagctaagcaatttgaattatctttagttgcagtggaagatagtcaatattta
cggccacgtgagcaatttttacaaaaaactttgcgtgcgattgctaagggagataaattg
caagatatattgccactagctaagcaagctggttcgcattatttagattctgcacaaaat
gttttagaatgctatcatcaatatgacttggatgatgcaattaataatacttggaaaatt
gctcagaaatgtaatgctgaagtgatctttcaaaaaccggtcttacctaaatatcatcaa
gataagtttccgacttcagaagaatatttgcgttatttggctcaaactggtttacaagcg
cgctttggtcaaaaaagtattccagccgagtatcagaaaagattaaattatgaattacga
gtcatcaatcagatggggttcgatgattattttttgattgtatgggatgtaattaactat
tgtcaccgagtaaaaattactactggtccaggacgtggttcagcttgtggttcactggtt
tcatactctttgcgtatcactgaagttgatcccatccaatataatttactgtttgagcgt
tttttaaatccggctcgtcatgagatgcctgatattgatctggacattcctgatattcaa
cggaatacagtaattaagtatatgtatcaaaagtatggcatggatcatgctgctcaaatt
ttgacttttggtacaatggctgctaaacaagtattaagagacgttggccgggtttttggc
ttaacaggaccagaaatcactaagtggactcacgcaatcccgtactctaaagataaaatg
gaattaaaaaaagcatatcaagagtctagagaactaagattattggttgatgcaacgcct
gagaataaattgttatttaagactgctttaggacttgagggattgccaaggcattattct
attcatgcggctggattggtgattagtgatgattcgattgctggcatttcgggattgcag
gctggtcctttcggcattcctgtaactcagcaaaccaaaaaatatgttgaatcattaggt
ttgctaaagatcgactttttgggattgcgcaatttgacagttttaggcaatattttagct
ttagtgcggcagcaaggtgtaaagctagatcctaatacaattccgttaaatgatcccaaa
acaatggaactgtttcaacaaggtaaaacagatgcagtcttccaatttgaatctggtggg
attcgtggtgttttgcgtaaattgcatcccgacaattttgaggacctagtagcggtgaac
gctttataccgtccaggtccaatgcaaaatattgacgcatttgttgcaagaaaaaatggt
acggctactgtgcattatcctgatcccagtttaaagcaaattttacaatcaacttatgga
attttggtttatcaggaacaagtcatgcaaacagctcaaatcctggcaggattttcattg
ggtgaagccgatattttacgacgtgcgatgtctaaaaagaatcagaatgtcattgagcaa
gaacgtggaaaatttattgctggtacggtcaaaaaaggtcatcctaaagaagtaggtgag
cgagtttatcattatatagagcaatttgctaactatggttttaaccgttcacacgcggtg
gcatataccaagattgccttttggctagcttatttgaaggttcattatcctgctgcattt
tacacagcgatgctcaattcatcaacgtctgctaaagcgcaaagctattcgatgcaagct
caggaagctggagttcgtattttgccgcctgatatcaatcacagccaattagactatact
ttacaagatggcaagattttagttggtttaaaagcaattaaaggattacgtcttgatttt
gctaaggaaatagctgccaatactaaaccgtataagtcttttaatgattttttgcgtaga
atcgatgctaagttcttacaagtagacgcaattgaagcattgattatggctggagcattt
gactcaatcgaagataatcgcaatgagttattgcttaactgcaaagatgtaattgctaat
gtgcaattaacgggacaaaatatgtctttatctgagattctgggggatgcaccacttaag
cctgctgagccaccgactgctgcccaaaaagcagaaatggaagagaaagctttaggcttt
actacaacaactactcctctaatagctgtacaaaaatatgcacaaaaatttaacgctaga
ccattgaatcaatttcagttaaatgatagtggtattagcgtgggtaaattaatgaagtta
aagcaaattaggaccaaaaatggaaaaacaatggcttttgctagttttgctgatacatct
agcgaacaagaaattattatttttccaccggcttatgaaaaatttggctctattttaaaa
gaaggagatatttatttactaggagtcaaggttcaaggtgatcgatttgaccaaaataaa
aaacagtatttcttaaccaatttgcgaaaagttaattttaaagaataa
DBGET
integrated database retrieval system
