Lactobacillus crispatus: LCRIS_01075
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Entry
LCRIS_01075 CDS
T01222
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCRIS_01075 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcr03019
]
LCRIS_01075 (recQ)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01075 (recQ)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCRIS_01075 (recQ)
Messenger RNA biogenesis [BR:
lcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCRIS_01075 (recQ)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCRIS_01075 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
CBL50522
UniProt:
D5H3D7
LinkDB
All DBs
Position
1074832..1076601
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AA seq
589 aa
AA seq
DB search
MNPEEVLKDIFGYTNFRPGQKQVIDLVLKKQNVLAVMPTGGGKSICYQIPALINSGVTLV
ISPLISLMKDQIDNLKQNGINAAALNSTTPQEEVNPILRQAYEGKIKLIYITPERLAIDY
FRYQLNFLDIDLVAVDEAHCISQWGHDFRPAYRQLLDGINSLKSRPNILALTATATPAVQ
DDICEQLNIPKENMIVTSFARPNISFKVVNSPQNTPLYISEYIKAHQDKAGIIYTNTRKK
VESLTDYLAKKGISVGAYHGGMDSSERSQVQEAFQFDEFQVIVATNAFGMGIDKSNVRFV
IHASSARNMESYYQEAGRAGRDGEESEAILIYHPGDLRQYRYFIDESDADDKYRELQYRK
LQTITDYANTGECLQQFIVRYFGQDCPPCGKCSNCLNQDELTDITIDAQKVISMVYELDG
RFGKTIVAQCLIGSKNQRVQEMNATQYKSFGSLRMKQKDAISLIDYLIASGYLEVEGSKY
PLVHVTNHGWDVLDGKTVVKRRIAKISVTTTHAGEESDTLFEALRQKRLELAKQQKVLAF
MIFSDRSLHDMAQIKPQNESEFLEVSGVGQAKMKKYGQAMMEIIKRKGK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaagaagttttaaaagatatatttggctatacaaattttcgcccaggtcaa
aaacaagtaattgatttagttttaaaaaagcaaaatgtgttagcagttatgccaaccggt
ggcggaaaatcaatttgttatcaaataccagctttgattaattctggtgtaactttggtt
atttcaccattaatttctttaatgaaagatcaaattgataatttaaagcaaaatggaatt
aatgcggcagcattaaattctactacaccgcaagaagaggttaatccaattttacgtcag
gcatatgaaggcaaaattaagttaatttatattacacctgagcgtttagcgattgattat
tttagatatcagttaaattttttagatattgatctagttgctgtcgatgaagcacactgt
atttcacaatggggacatgattttcgacctgcttatcgtcaattattagatggaatcaat
tcactaaaaagcagaccaaatatattagctttaacagcgacagccacgcctgcggttcaa
gatgatatttgtgaacaattgaatattcccaaggagaatatgattgttacctcttttgct
cgccctaatatatcgtttaaagtggtcaactcaccacaaaatactccattatatatttca
gaatatattaaggcacatcaggataaagcggggattatttacactaatacacgtaaaaaa
gttgaaagtttgacagattatttggctaagaaaggaatctctgttggtgcttatcatggt
ggaatggattcttcagaacgaagtcaagtacaagaagcttttcaatttgatgaatttcaa
gtaattgtagcaactaatgcttttggaatggggatcgataaaagtaatgtcagatttgtg
attcatgcctcaagtgcccgtaatatggaaagttactatcaagaagcaggtcgggcaggc
cgtgatggggaagaaagcgaagcgattttaatctatcatcctggtgacttgcgtcaatat
cgctactttattgatgaatcagatgcggatgataaatatcgagaactgcaatatcgtaag
ttgcaaacaattactgattatgctaatactggtgaatgtttgcagcaatttatcgtccgt
tattttggtcaagattgtccgccatgtggcaaatgctcaaattgtctaaatcaggatgaa
ttgactgacattaccattgatgctcaaaaagtgattagtatggtttatgaactagatggt
cgctttggaaaaacgatagttgctcaatgtttgattggctcaaaaaatcagcgcgtgcaa
gaaatgaatgctacacaatataagtcttttggctctctaagaatgaagcaaaaagatgct
ataagcttgattgactatttaattgcttcaggttatctagaagttgaaggtagcaaatat
ccactagtgcatgtaactaatcatgggtgggatgtactagatggcaaaactgtagtcaaa
cgacgaattgctaagatttcagtaactactactcatgctggtgaagaaagtgatacttta
tttgaagctttaagacaaaagcgtttggaattagctaagcagcaaaaagtactagcattt
atgattttttcagatcgctctttgcacgatatggcacaaattaaaccacaaaatgaaagt
gaatttttagaggtaagtggtgtagggcaagcgaagatgaaaaagtatggtcaggctatg
atggaaataatcaaaagaaaaggaaaatag
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