Lactobacillus crispatus: LCRIS_01261
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Entry
LCRIS_01261 CDS
T01222
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03410
Base excision repair
lcr03430
Mismatch repair
lcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCRIS_01261 (recJ)
03430 Mismatch repair
LCRIS_01261 (recJ)
03440 Homologous recombination
LCRIS_01261 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01261 (recJ)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LCRIS_01261 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCRIS_01261 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LCRIS_01261 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
ssDNA-exonuc_C
RecJ_OB
DHHA1
Spectrin
Motif
Other DBs
NCBI-ProteinID:
CBL50708
UniProt:
D5GY49
LinkDB
All DBs
Position
complement(1261268..1263541)
Genome browser
AA seq
757 aa
AA seq
DB search
MKWQERTAQELAPDLVEKYQLSPIAATLFALRGINTDEKLDFWFNATEDNLADPALMHDM
DKAIERINQAIDNGEKITIYGDYDADGITATTIMTETLSILGADVHYFIPDRFKDGYGPN
LARYQDIVADGTKLIITVDNGVTGIEEVKYAQEHSVDVILTDHHTFQEEKPAAYATVHCN
YPGQKYPFDDYCGAGVAYTICRGLMQDTMPELLDLAMIGTIGDMVKVTGEGHIIVKRGLE
MLNQTERPGLRALIKNAGLTLGGINETDVGFNIAPRLNAVGRLDNANLAVELLLSDDDLE
AQKIADRIEELNNQRKELTTQVYEKCMDLIQKNSWQKQNTLVLYDPEFHEGVLGLVANKI
VEKTHKPTIVLTKNAAGEIKGSGRSFTGFNLFNALNPIKDQYLTKFGGHDFACGLSMEEE
KIAPLRDQFENNFQVEGGLETKDYDMELPMKGLSPQTLAQINQVGPFGTGDPQPIFSISD
PTITHFFKMGKDKNHVKFTVNKQGGNLAVVGFNKGFLNNNLLPFISKIFVQLSLNTYRKQ
ISLQGIMTGLAFASPKLAVPMPVIDLRQEKYVMGFADRYLLFDQKNIPIVRNRLQIDEDK
ISLVKDYDQTGETIALLDVPRNQVELDEALEKNYQQIYLRFLLDQLPVEQIPAKSYFGNV
LKYIYSHPTLTPADYRTVAPYLGLDYDSVLFILRVFFELGFVKLDEGKLVGAPAPKKQPL
TASKYLMATSSQIKFVSQLRTMPSQRLITYINNLANN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggcaagaaagaacagctcaagaattagcaccagacttagttgaaaagtatcaa
ttgagtccaatcgcagctacgttatttgctttacgcggtattaatacggacgaaaagctc
gatttttggtttaatgctacagaagataatttagctgatccagcacttatgcacgatatg
gataaagcgattgagcgaattaatcaagcaattgataatggtgaaaaaattactatttat
ggcgattacgatgccgatgggattaccgcaacaaccattatgacagagacattaagtatt
ttgggtgcagatgttcattattttatccctgatcgctttaaagatggttatggtcctaat
ttagctcgataccaagatattgtagctgatggaactaaattaattatcacagttgataat
ggagttactgggattgaagaagttaaatatgcgcaggagcatagcgttgatgtgattttg
acagatcatcatacttttcaggaagaaaaaccagctgcttatgcaactgtccattgtaat
tatcctgggcaaaaatatccttttgatgactattgcggtgctggagtcgcttatacaatt
tgtcgtggtttaatgcaagatacgatgcccgaattacttgatttagcaatgatcggtacg
atcggtgatatggttaaagtcacgggtgagggtcatattattgttaagcgtggcctggaa
atgcttaatcaaacagagcgacctggtttgcgtgctttaattaaaaatgctggtctaact
ttaggtggaatcaatgagactgatgtaggattcaatattgctccacgtttgaatgctgtc
ggccggttagataatgctaatttggcggttgagcttttactaagtgatgatgaccttgaa
gcacaaaaaattgctgataggattgaagaacttaataatcagcgtaaagagttgaccact
caagtttatgaaaaatgtatggatttgattcaaaaaaatagctggcagaagcaaaatact
ttagttttatatgatccagaatttcatgaaggtgtcttggggttagttgctaataagatt
gttgaaaaaacacataagccgacaattgttttaactaaaaatgctgcaggtgaaattaaa
ggatcaggtcgttcatttactggatttaatttatttaatgcattgaatcctattaaagac
caatacttaacaaaatttggtggtcatgattttgcttgtggcttgtcaatggaagaagaa
aaaattgctccgttacgagatcaatttgaaaataatttccaagtcgagggtggtcttgaa
actaaagattatgatatggaactacctatgaaaggattaagtccgcaaactttagcgcaa
atcaaccaggtaggaccttttggtacgggtgatccacaaccaatttttagtatttctgat
ccaacgatcactcacttttttaaaatgggtaaagataagaatcacgttaaatttactgtt
aacaagcaaggtggaaatttagcggtagttggttttaataagggctttttgaataataat
cttttaccatttatttctaaaatttttgtgcagttatcattaaacacttaccgaaagcaa
atttctttacaaggaattatgactggtctcgcttttgcttcccctaaattagccgtccca
atgccggtaatcgatttacgtcaagaaaaatatgtgatgggttttgctgatcgctatcta
ttatttgatcaaaaaaatattccgattgtgcgtaatagactgcaaatcgatgaagataag
attagtttggttaaagattatgatcaaacaggtgaaacgatcgctttacttgatgtgcca
cgtaatcaagttgagttggatgaagctttggaaaagaattaccaacagatctatttgcgt
tttttgcttgatcaattaccagtcgagcaaattccagctaaaagttattttggaaatgtt
ttaaagtatatttatagccatccaacattaaccccagcagattatcgaaccgtagcacca
tatttaggtttagattatgatagtgtgcttttcattctgagagtattttttgaacttggt
tttgtaaaactagacgaaggcaagctagtcggtgccccagctcctaagaagcagccatta
acggcatcgaaatacttgatggcaacttcttcgcaaattaagtttgtcagtcaattgcgg
acgatgccaagtcaacgtttaattacatatattaataatttggcaaataattag
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