Lactobacillus crispatus: LCRIS_01270
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Entry
LCRIS_01270 CDS
T01222
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcr03016
]
LCRIS_01270 (truB)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LCRIS_01270 (truB)
Transfer RNA biogenesis [BR:
lcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LCRIS_01270 (truB)
Prokaryotic type
LCRIS_01270 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CBL50717
UniProt:
D5GY58
LinkDB
All DBs
Position
complement(1272668..1273540)
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AA seq
290 aa
AA seq
DB search
MLNGILVIDKDKGMTSADVVYHLRRVLNIRKIGHAGTLDPEVTGVLPIAIGQATKLIEMM
HTRPKEYIGTGLFGYSTDSYDATGTVLKEKKLIQPFSGAEIQENMNKFVGEIVQVPPIYS
AVKVNGKHLYEYAREGIEVERPQRRVEVKQYDLTKEPVFDINTGQESFDFKIKCSKGTYV
RSLVNDLGEKLDCPATMTYLRRTASSGFDITQAVKLKEIEENPEKATELIQPIDAFFKEY
TQVDLTEEKWLKVKNGAGISLETNAKKVALRYNKKVKAIYEKKESFIAQA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacggaattttagttattgataaagataaagggatgactagtgcagatgtagtt
tatcatttgcgccgcgtattaaatattagaaaaataggacatgctggtacgcttgatcct
gaggtgacaggcgttttaccaattgctattggtcaggctactaaattaattgaaatgatg
catactaggccaaaagaatatattggcacgggactatttggttatagcacagatagttat
gatgcaactggaactgttttaaaagaaaaaaagttgattcagcctttttctggtgcagaa
attcaagaaaatatgaataaatttgtaggagaaattgttcaagtgcctccaatttattct
gctgttaaagtgaatggtaaacatctttatgaatatgcgcgtgaaggaattgaagttgaa
cggcctcagagaagggttgaagtcaaacaatatgatctaactaaagaaccagtttttgat
ataaatactggacaagaaagctttgattttaagattaaatgcagcaaaggcacttatgtt
agatcgttagttaatgatctaggtgaaaaattagattgccccgcaacgatgacttatttg
agaagaacagctagttctggctttgatattacacaagcagtaaaattaaaagagattgaa
gagaatccggaaaaggccactgaacttatacagccgattgatgcattttttaaggaatac
actcaggttgatttaactgaagaaaagtggcttaaagttaaaaatggagcaggtatttcg
cttgaaactaatgcgaaaaaagttgcactacgatacaataaaaaggtgaaagcaatttat
gaaaaaaaggaaagctttatcgcccaagcttaa
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