Lactobacillus crispatus: LCRIS_01333
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Entry
LCRIS_01333 CDS
T01222
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCRIS_01333 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcr03021
]
LCRIS_01333 (rpoZ)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01333 (rpoZ)
Enzymes [BR:
lcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCRIS_01333 (rpoZ)
Transcription machinery [BR:
lcr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCRIS_01333 (rpoZ)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCRIS_01333 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CBL50780
UniProt:
D5GYC1
LinkDB
All DBs
Position
complement(1343526..1343750)
Genome browser
AA seq
74 aa
AA seq
DB search
MRITYPSIDKLLSRVDSRYSLSVLAAKRAHELEAGDPPTLEHFKCDKAVGKALEEIAAGK
VTVDPAHAEVNLED
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgagaattacttacccatcaattgataaattattgtcacgtgttgattcacgctattca
ttatctgttcttgccgctaagagagcacatgaacttgaagctggtgatccaccaactttg
gaacattttaagtgtgataaggctgttggtaaggcacttgaagaaattgctgctggtaaa
gttactgttgacccagctcatgccgaggttaacctcgaagattaa
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