Lactobacillus crispatus: LCRIS_01338
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Entry
LCRIS_01338 CDS
T01222
Symbol
ispA
Name
(GenBank) Geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00900
Terpenoid backbone biosynthesis
lcr01100
Metabolic pathways
lcr01110
Biosynthesis of secondary metabolites
Module
lcr_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LCRIS_01338 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcr01006
]
LCRIS_01338 (ispA)
Enzymes [BR:
lcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LCRIS_01338 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LCRIS_01338 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
LCRIS_01338 (ispA)
Prenyltransferases [BR:
lcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LCRIS_01338 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CBL50785
UniProt:
D5GYC6
LinkDB
All DBs
Position
complement(1347414..1348283)
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AA seq
289 aa
AA seq
DB search
MTAFTYFKDEWTPVIDDYLAKHLASEVEDQKISQIMAYSVMAGGKRLRPLLFLATLNALG
RKIEEPEIRIACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLP
MGIQWIAEGSKSAKLVDLITKAVGPNGMVGGQYLDIDSTNNASVAGDAKFINKMEWLKTG
CLIQASVEMAAVYAGASDIEQVKLVDFAKIFGRSYQIYDDLVDVVETSAEAGKATHKDQA
EGKNNTLTLLGIDQSRKELTDLIKQAQDDLHGLKGEVLAGFLDLYQKVL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatttacttattttaaagatgaatggaccccagtaattgatgattatctggct
aagcatttggctagtgaggttgaagatcaaaagatcagtcagattatggcctactcggtg
atggctggcggcaagcgcttgcgtccgttattgtttttagctacgttaaatgctttaggc
agaaagattgaagaacctgaaattaggattgcctgcgggattgaactgattcacacttat
tccttgattcatgatgacctgcctgccatggataacgatgactatcggcgcggtaagctg
actagccacaaaaaatggggtgaggctgaggcaattttagctggggatgcgctcttgccg
atgggaattcaatggattgcggaaggcagtaagtcggcgaaattggtagatttaattacc
aaagcagttggccctaatgggatggttggcggtcaatatttggatattgattcaactaac
aatgctagtgttgcgggtgatgccaagtttatcaataagatggaatggctgaagaccggt
tgcttaattcaggctagcgttgagatggctgcagtttatgcaggagctagtgatattgaa
caggtaaaattagtcgattttgccaaaatttttggtcgttcataccaaatctatgacgac
ttggttgatgtcgttgaaactagtgcagaagctggtaaggcaacccacaaagatcaagct
gaaggtaaaaacaatactttgactttattgggaattgaccaaagccgcaaagaattaact
gatttgatcaagcaggcacaagatgatttgcatgggctcaaaggcgaagtacttgctggc
ttcttagatctttatcaaaaggtgttataa
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