Lactobacillus crispatus: LCRIS_01464
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Entry
LCRIS_01464 CDS
T01222
Symbol
hupB2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcr03032
]
LCRIS_01464 (hupB2)
03036 Chromosome and associated proteins [BR:
lcr03036
]
LCRIS_01464 (hupB2)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01464 (hupB2)
DNA replication proteins [BR:
lcr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LCRIS_01464 (hupB2)
Chromosome and associated proteins [BR:
lcr03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LCRIS_01464 (hupB2)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LCRIS_01464 (hupB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-DNA_bdg
Nrf1_DNA-bind
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CBL50911
UniProt:
D5GYQ2
LinkDB
All DBs
Position
1480509..1480793
Genome browser
AA seq
94 aa
AA seq
DB search
METISKKQLVDQIAAKTDATKTDINTILDAYIDVVKSNVAEGNKVQLVGFGAFELRHRAA
RKGRNPQTGKEIEIAASNVPAFKPGKSFKDEVNK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggaaactatttctaagaaacaattagtagatcaaatcgctgcaaagactgatgctact
aagacagacattaacactattttggacgcttacatcgacgttgttaagagcaatgttgct
gaaggcaacaaggtacaattagttggcttcggtgccttcgaacttcgtcaccgtgctgct
cgtaagggtcgtaacccacaaactggtaaggaaattgaaattgctgcatcaaacgttcca
gcattcaagccaggtaagagcttcaaggatgaagttaacaagtaa
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