Lactobacillus crispatus: LCRIS_01531
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Entry
LCRIS_01531 CDS
T01222
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr03030
DNA replication
lcr03410
Base excision repair
lcr03420
Nucleotide excision repair
lcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCRIS_01531 (polA)
03410 Base excision repair
LCRIS_01531 (polA)
03420 Nucleotide excision repair
LCRIS_01531 (polA)
03440 Homologous recombination
LCRIS_01531 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcr03032
]
LCRIS_01531 (polA)
03400 DNA repair and recombination proteins [BR:
lcr03400
]
LCRIS_01531 (polA)
Enzymes [BR:
lcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCRIS_01531 (polA)
DNA replication proteins [BR:
lcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LCRIS_01531 (polA)
DNA repair and recombination proteins [BR:
lcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LCRIS_01531 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCRIS_01531 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Polysacc_deac_2
DUF61
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CBL50978
UniProt:
D5GYW9
LinkDB
All DBs
Position
complement(1540617..1543280)
Genome browser
AA seq
887 aa
AA seq
DB search
MADKKLLLIDGNSVAFRAFYALYRQLESFKSPDGLHTNAIYAFKNMLDVLLKDVDPTHVL
VAFDAGKVTFRTKMYGDYKGGRAKTPEELLEQMPYIQEMLHDLGIKTYELKDYEADDIIG
TFATKGEENGFTTTIVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDSSDNYPGVEGIGPKTASNLIQKYHTVENLYDHIDDLKASKRKERLIRDKH
NAILGKKLATIDRHSPVTIDIDDVKRQPIDYEKLRQFYEKMNFRKFLAELNASGQGQDAT
EVEKVEYTVLDDQNVKEIKANADDQIEFYLAMLGANYHLAPFVGFALKINDQIYVSRDVE
LLQETNLRHLLEDEQIKKNVFDLKRTMVGLHRLGIHVHGQDYDMLLASYLINNENNSNDL
GEIAHLYGDYSVKTDIEIYGKGKSEHVPDDDEELFNHLASKVNAIENLKQPLLEKLKEHE
QDDLFDTIEIPTARVLARMEINGMKVEASTLLELQNEFAVRLKELEDKIYQQAGERFNLN
SPKQLGHILFEKLNLPVIKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPTEPDGYIF
SCDYSQVELRVLAHVSGDQNMQEAFKTGYDIHSHTAMRIFHLDSPDEVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKRAQEFIDNYFEQYPQIREYMDKAVQTAREKGYAETIMHR
RRYLPDIHAKKFTVRSFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVH
DELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaaattacttctaatcgatggtaactccgtagcttttagagccttctat
gcactttaccgccaactagaatcattcaagagcccagatggtttgcatactaatgccatt
tatgcttttaaaaatatgctcgatgtactcttaaaagatgttgatccgactcatgtgttg
gtggcttttgatgcgggcaaagtaacttttagaactaaaatgtacggtgactacaagggt
ggtcgggctaagacgccagaagagttgttagaacaaatgccgtatattcaagagatgcta
catgatcttggtattaagacttatgaattaaaagattatgaagccgatgatattattggt
acttttgctactaagggtgaagaaaatggctttactacgacaattgtaactggagaccgt
gacttaacccaacttgcttcagacaaaacgactgttgaagtaactaagtctggtgtgtca
cagcttgaggcttatactcctgaacatatgaaggaagtaaatggtgtaacgccaactgaa
ttcattgatatgaaggctttaatgggagattcatcggataattatccaggcgttgagggg
attggtcctaagacagcttctaatctaatccaaaaatatcatactgttgagaatctttat
gatcatattgatgatttgaaagcttcaaaacgaaaagaacgtttgattcgcgataaacac
aatgctattttaggcaaaaaactggctacaattgatcgtcattctccagtgacaattgat
attgatgacgttaagcgtcaaccaattgattatgaaaaattacgccaattctatgaaaag
atgaatttccgtaagttcttggcagaactgaatgctagcggtcaaggccaagatgcaact
gaagtagaaaaagttgaatacacagttcttgatgaccaaaatgtcaaggaaatcaaagct
aatgcagatgaccaaattgaattttatcttgctatgctaggtgctaactatcaccttgct
ccatttgtcggttttgctttaaaaatcaatgatcaaatttacgtttcacgagatgttgaa
cttttacaagagactaatttgcgacatttattagaagatgagcaaattaagaaaaatgtc
tttgatttaaagcggacaatggttggcttacatcgattaggtatccatgttcacggtcaa
gattatgatatgttgttagcttcatatttgatcaataatgaaaataattccaatgatcta
ggtgaaattgctcacttgtatggtgattattcagttaaaaccgatatagaaatctatgga
aaaggcaaaagtgagcatgttcctgatgacgatgaagaactatttaatcatttggcttca
aaggttaatgctatcgaaaacttgaagcagccactacttgagaagcttaaggaacacgaa
caagatgacttgtttgatacaatcgaaattccgactgctcgtgtattagcccggatggaa
atcaacggaatgaaagtggaggcaagtactctgctcgaactgcaaaatgaatttgctgtt
cggttaaaagagctggaggataagatctatcaacaagcaggcgagcgctttaacttgaat
tcacctaagcaattaggccatattttgtttgaaaagcttaacttgccagtaattaagaag
actaaaacaggttattcaacttctgttgaagtgctggatcagttaaagacacaaagtcca
attgttagtgaaattttggattaccgtcaaattgctaagattcaatcaacctatgttaaa
ggcttgcttgatgtaattcagccggatggacgagtacatacgcgttatttgcaaacctta
acagcaactggacgtttgtctagtgtggatcctaatttgcaaaatattcctactcgaact
gaggaaggaaagcaaatcaggaaggcctttgtgccaacagagccggatggctatatcttt
tcttgcgattattcgcaggttgagttgcgggtattagcacatgtttccggtgatcagaat
atgcaagaagcctttaagacaggctatgatattcactcacatacagcaatgagaattttt
catttagattcaccggatgaagtaacgccattgatgaggcgtcatgctaaagccgttaac
ttcggtattgtttatggtatttctgattatggtttatcaaagaatttaggtatttctaga
aaacgtgctcaagagtttattgacaattactttgaacaatatccacaaattcgtgaatat
atggataaggctgtgcaaacggctcgtgaaaagggctatgcagaaacaattatgcacaga
agacgctacttgcctgatattcatgctaagaaatttacagttcgttcttttgctgaaaga
actgcgattaactcgcctattcaaggatcagcggccgatattatcaagattgctatgatc
aatatgcaaaagaagctagatgaactacatttgaagaccaagatggtcgttcaagtacat
gacgaattgatttttgatgtgccaaaagatgaattagaaacgattaagaagatagttcca
gaagttatgcaatcggcagtgaagcttgatgtgccattgattgcagattctggttggggt
cataattggtatgatgcaaagtag
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