Lactobacillus crispatus: LCRIS_01554
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Entry
LCRIS_01554 CDS
T01222
Symbol
cbf
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcr
Lactobacillus crispatus
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcr03019
]
LCRIS_01554 (cbf)
Messenger RNA biogenesis [BR:
lcr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LCRIS_01554 (cbf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
CBL51001
UniProt:
D5GYZ2
LinkDB
All DBs
Position
complement(1562035..1563012)
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AA seq
325 aa
AA seq
DB search
MLKRLLDYNDGEEMDIVVLIKNSQLRHNKKNKLFLAMQFSDGSGEIRGNYWDANNQDAAT
FSTGTIVELNGKREEYQGRPQIRIYSLRVVGPQEGYELDQFIKSAPEPVNEMEAEINKFV
MQIDNPTWTKIVKYLLQKWHDRFYDHPAGKSNHHAVRGGLAFHTLSMLKDAKGLADNYEQ
VNRSLLYAGCILHDMGKVLELSGPAATQYTTEGNLVGHLVLIDEQIMLAAQDMKMNLESE
DLLLLRHMVLSHHGRFEYGSPKLPALLEAELLHRIDDLDAAVYAVTNALQHTPKGEFTEP
LLSQDGKRYYRPMHDSALDNAKHLE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagagattgttagattacaacgatggagaagaaatggacattgttgttttgatt
aaaaactcacagttgcgtcataataaaaagaataagttgtttttagcgatgcaattcagt
gatggctcaggcgagattcgcggtaattactgggatgctaacaatcaagatgcagcaact
ttttcaactgggacaatcgttgagttgaatggcaaaagagaagaatatcagggtcgcccc
cagattaggatctattctctgcgcgtggtcggtccacaagaaggctatgaattagatcaa
tttattaaatcagcgccggaaccagttaatgagatggaagctgaaattaataaatttgtg
atgcagattgataatcctacctggacaaaaattgtgaagtatttacttcaaaaatggcat
gatcgtttttatgatcatcctgctggtaaaagcaaccaccatgcggtccgcggaggttta
gcttttcatactttatcgatgcttaaggatgccaaaggtttggctgataattatgagcaa
gtgaatagatcgctactttatgcgggatgcattttgcatgatatgggaaaagtactggaa
ctttcaggtcctgccgcaactcaatacacgactgaaggcaatttggttgggcatctggtt
ttaattgatgaacaaattatgctggccgctcaggatatgaagatgaatctggagtcggaa
gatttactcttattgcggcatatggtgcttagtcaccatggccgctttgaatatggttca
cccaaattgccggcattgctagaagcggaattattgcaccgaattgatgatttagatgct
gcagtttatgcagtaacgaatgccctgcagcatacgcctaaaggcgagttcaccgagcca
ctactgagtcaagatggcaagcgatattatcgaccgatgcacgattcagcgctagataac
gcaaaacatttagaataa
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