Lactobacillus crispatus: LCRIS_01734
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Entry
LCRIS_01734 CDS
T01222
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00521
Streptomycin biosynthesis
lcr00523
Polyketide sugar unit biosynthesis
lcr00541
Biosynthesis of various nucleotide sugars
lcr01100
Metabolic pathways
lcr01110
Biosynthesis of secondary metabolites
lcr01250
Biosynthesis of nucleotide sugars
Module
lcr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCRIS_01734 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCRIS_01734 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCRIS_01734 (rfbC)
Enzymes [BR:
lcr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LCRIS_01734 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CBL51181
UniProt:
D5GZH2
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All DBs
Position
complement(1763756..1764364)
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AA seq
202 aa
AA seq
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MGQIKVEKNVGGIEGLAVITPTVHGDDRGYFMETFNQRDMMDAGFSINFVQDNQSSSTKG
VLRGLHFQKHYPQIKLVRAVRGSVFDVAVDLRSESKTYGKWYGVELTAENKKQFLIPQGF
AHGFLVLSDVAEFCYKVNDFWHPNDEGGMAWNDPEIGIKWPHVKGDYPGSADASGYTLDD
GTKLNLVERDQEWKGLKDTFKF
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaattaaagtagaaaaaaatgtcggtggtattgaaggtttagcagtaattacc
ccaactgttcacggtgatgaccgtggttactttatggaaacttttaaccaaagagacatg
atggatgctggttttagcattaacttcgtacaagataaccaatcaagttcaaccaagggt
gtattgcgtggtttacactttcaaaagcattatccacaaattaagttggttcgtgctgtt
cgcggtagcgtttttgatgttgctgttgaccttcgtagtgaatcaaaaacttatggtaag
tggtacggcgttgaattgaccgctgaaaacaagaagcaattcttgattccacaaggtttt
gcacatggctttttggtattaagcgatgtagctgaattttgttacaaggttaatgatttt
tggcaccctaatgatgaaggcggtatggcttggaacgatcctgaaattggtatcaagtgg
ccacacgttaagggcgactacccaggcagcgcagatgctagcggctacactttggacgac
ggcactaagctaaacttagtagaacgtgaccaagaatggaaaggtttgaaagataccttt
aagttttaa
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