Lactobacillus crispatus: LCRIS_01736
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Entry
LCRIS_01736 CDS
T01222
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lcr
Lactobacillus crispatus
Pathway
lcr00521
Streptomycin biosynthesis
lcr00523
Polyketide sugar unit biosynthesis
lcr00525
Acarbose and validamycin biosynthesis
lcr00541
Biosynthesis of various nucleotide sugars
lcr01100
Metabolic pathways
lcr01110
Biosynthesis of secondary metabolites
lcr01250
Biosynthesis of nucleotide sugars
Module
lcr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCRIS_01736 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCRIS_01736 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCRIS_01736 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCRIS_01736 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCRIS_01736 (rfbB)
Enzymes [BR:
lcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCRIS_01736 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
Statherin
Motif
Other DBs
NCBI-ProteinID:
CBL51183
UniProt:
D5GZH4
LinkDB
All DBs
Position
complement(1765277..1766314)
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AA seq
345 aa
AA seq
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MKVIVTGGAGFIGSNFIFYMMKKHPDYEIICLDKLTYAGNLSTLKSVLDKPNFKFVKLDI
CDREGVYKLFEEEKPDVVVNFAAESHVDRSIENPEIFLETNIIGTSVLMDACRKYGIKRF
HQVSTDEVYGDLPLDRPDLFFHEDTPLHTSSPYSSSKASADLLVGAYGRTYNLPVTISRC
SNNYGPYQFPEKLIPLMIQRALNNEKLPVYGDGENVRDWLYVEDHCKAIDLILENGKPGE
IYNIGGHNEMHNIEIVKLICDYLDKPYSLIEHVTDRKGHDRRYAIDPDKIHSELGWLPET
MFKDGIKKTIQWYLDNKEWWENIISGDYQNYYEEMYGNRKVLDKD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgtcactggcggagctggttttattggttcaaatttcatcttttacatg
atgaaaaagcatcccgattatgagattatttgcttagataagttaacctatgcaggtaat
ttatcaaccctgaagagcgttttagacaagcctaattttaagtttgtcaagttagatatt
tgtgatcgcgagggtgtttacaagctttttgaagaagaaaagcccgatgtagttgtcaac
tttgctgctgaaagccacgttgaccgttctattgaaaaccctgagattttcttagaaacc
aatattattggtacttcagtcttaatggacgcatgtcgtaagtatggcatcaagcgattc
caccaagtttcaactgatgaagtctacggcgatttgccacttgatcgtccagatctcttt
ttccacgaagacacgccccttcatacctcaagtccttactcatcaagcaaggctagtgca
gacttgttagttggtgcctacggcagaacatataatttgccagtaaccatttctcgttgt
tctaacaactatggtccatatcaattcccagaaaaattgattccattgatgatccaaaga
gcgttaaacaatgaaaagttgccagtttatggtgatggtgaaaacgttcgcgactggctt
tatgttgaagatcactgtaaggcaattgatctaattttggaaaatggtaagccaggtgaa
atctacaacattggtggtcacaacgaaatgcacaatattgagatcgttaaattaatttgt
gattacttagataagccatattcattgattgagcatgtaactgaccgtaagggacacgac
cgtcgttacgctatcgatccagataagatccactcagaattaggctggttgccagaaacc
atgtttaaagatggtatcaagaagaccattcaatggtacttggacaacaaggaatggtgg
gaaaacattatttctggtgattaccaaaattactatgaagaaatgtatggcaacagaaag
gtattagacaaggattaa
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