Lactobacillus crispatus: LCRIS_01976
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Entry
LCRIS_01976 CDS
T01222
Name
(GenBank) Transcriptional regulator
KO
K20375
HTH-type transcriptional regulator, pheromone-responsive regulator
Organism
lcr
Lactobacillus crispatus
Pathway
lcr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCRIS_01976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcr03000
]
LCRIS_01976
Transcription factors [BR:
lcr03000
]
Prokaryotic type
Helix-turn-helix
Other families
LCRIS_01976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rgg_C
HTH_3
HTH_31
Nod1
DUF1749
Motif
Other DBs
NCBI-ProteinID:
CBL51423
UniProt:
D5H064
LinkDB
All DBs
Position
1991330..1992190
Genome browser
AA seq
286 aa
AA seq
DB search
MFKYGSVYKQLRKDQEITQTEACKGICSISKLSRWENNQVEVEFSTAIALLRRINITLDE
FTHYAAMKTEFTLPDDIITAIKDNDTKVLEKFVQEQLNHYHATKNILELKNIILVCNQLF
LMTGKNYLTPADINRIGSYLLHNTVWSKYNILLFANSPFLLNSKIGYQIALRIIHNFHPT
ESLNENTTIFIGGLSDTVIALVFKKKLDYAQKILNELKKIELRFYLMFFSLTLTLLQKII
DYCHTLNAQPVLAMIDTIVQLNCMEVAQKWLEIFKDVQQIWPEKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatatggttcagtttacaaacaattgcgcaaagatcaagaaatcactcaaact
gaagcctgcaagggtatttgttcaatctccaagttatcacgctgggaaaacaatcaggta
gaagttgagtttagcactgccattgcattactcaggcgcatcaacattacgcttgacgaa
ttcacgcattacgctgcaatgaaaacagaatttacattgccagacgacattataacggcc
attaaagacaatgatacaaaagtactcgaaaaatttgttcaggagcagctaaatcattat
cacgccaccaaaaatattctcgaactcaaaaacatcattcttgtctgcaatcaattattt
ctcatgactggtaaaaactatctaacacctgcagacattaatcgaatcggttcatacctg
cttcacaacaccgtttggtctaaatacaatatcttgctctttgctaactcaccgtttttg
ctaaattctaaaatcggctatcaaattgctctgcgaattattcacaactttcatcctaca
gaaagtttgaacgaaaacaccaccattttcataggcggtttatctgatacagttattgcc
ttagttttcaaaaagaagctagattacgctcaaaaaattcttaatgaattaaaaaagata
gaacttcgcttctatctcatgttctttagtttaacattgacccttttacaaaaaattatc
gactactgccatactctcaacgcacagcctgtattggcaatgattgataccatagttcag
ctgaattgcatggaagttgctcaaaaatggcttgagatttttaaagacgtacaacaaatc
tggccagaaaaagaaaattaa
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