Lignipirellula cremea: Pla8534_19500
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Entry
Pla8534_19500 CDS
T06949
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla8534_19500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_19500
Enzymes [BR:
lcre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Pla8534_19500
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pla8534_19500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QDU94162
UniProt:
A0A518DQR9
LinkDB
All DBs
Position
complement(2561629..2562564)
Genome browser
AA seq
311 aa
AA seq
DB search
MTDEAEIRERRRLAVLQRLQSLHRAGLRQLPRPDRQAVETLQQTFTGAAPRVEPIVEAPS
ATPSSSASPSSASPAATSSAPTPTAAASSAEAPPVSRPAPRPVASTSLFSGQAGGSDMLG
RAATLEQRRDALRLVADEVAGCTRCALSRSRTQTVFGVGNPMTRIVFLGEGPGAEEDRVG
EPFVGAAGQLLDKMISAMSLSRDEVYILNVVKCRPPGNRNPEPEEALACRDYLDRQLAIL
QPEFICCLGAVAAKNLLDSPKSVGQLRGHIWRHGPSKVVVTYHPAYLLRAPQEKRKAWED
LQLLMGEMGLL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgaagcggaaatccgggaacgcaggcgactggccgtactgcagcggctgcag
tccctgcatcgcgccgggctccgccagttgcctcgccctgatcgccaggctgtggagacg
ctgcagcaaaccttcaccggcgccgccccgcgggtcgaaccaattgtggaggcgcccagc
gcgacgccttcgagcagcgcctcgccgagcagcgcctcgccggcggctacctcctcggcg
ccgactccgacggctgcagcctcttctgccgaagcaccgccagtcagccggccggcgcct
cgaccggtggcgagcacttcgttgttcagcgggcaggcaggcggtagcgacatgctgggc
cgcgctgccacactggagcagcgtcgcgacgctctgcgtctggtggcggacgaagtggcc
ggctgcacgcgttgtgcgctatcgcggagtcgcacgcaaacggtgtttggcgtgggcaat
cccatgacgcggattgtgtttctgggagagggaccgggagccgaggaagatcgcgtcggc
gagccgttcgtcggggcggccgggcaactgctggacaaaatgatcagcgcgatgtcgctc
agccgggacgaagtctacatcttgaacgtggtcaaatgccgtccgcccggcaaccggaat
ccggaaccggaagaggcgctcgcctgtcgcgattatctcgaccggcaactggccattctg
cagccggagttcatctgctgcctgggcgcggtcgcggcgaagaacctgctggattcgccc
aagtcggtcggccagttacgaggtcacatctggcggcacggcccttccaaagtggtcgtc
acgtatcaccctgcctatctgctccgggcgccgcaggagaaacgcaaagcgtgggaagac
ctgcagctgctgatgggcgaaatgggcctgctgtag
DBGET
integrated database retrieval system
