Lignipirellula cremea: Pla8534_22380
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Entry
Pla8534_22380 CDS
T06949
Symbol
rpsA_3
Name
(GenBank) 30S ribosomal protein S1
KO
K06959
protein Tex
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Pla8534_22380 (rpsA_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
Tex_central_region
S1
HHH_9
YqgF
HHH_7
S1_RRP5
T2SSK
HTH_29
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QDU94447
UniProt:
A0A518DRH3
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Position
2938352..2941912
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AA seq
1186 aa
AA seq
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MVNTSSIDLQQAAKELQLPLDKVNRTLELLDEGNTVPFITRYRKDQTGGLDDEQIRAVQA
TVNRLRQLAERKTTILKSIESQGSLTPELEQQIAQARSPKLLEDIYLPFKPKKQNLAATA
RRRGLEPLAKEILDGTVSQADLTARMQEFVNAETGLTSVEEVQQGVGHIIAEWYSERVDL
RQELRKRLWNDGSLVSTRMENPPPAAVGEDSADDDSLGDDDDPTAEDSTAEDSLDDDDSS
AGDSADEIALSEDQAETSAEETAVTPPAPPEAAVSDPTLAAGAEADQAIEADQAIEAAKA
PAAAGESDTPAEPEGESSSTRHAMSSSSEDEGAKPLKRVPGTEDTPASVVGPSEEASSPA
PENDSPAPVPVAALSEDDPSAKEASAAESEATVAAGSEDAPVGVEGEVAAEATPPASKPK
GESAGKKSGSKKKPSKQKQLSKTAISKQLRKDAKKRKRQKLEGSFKNYFQFSQSLAQLPP
HRILAINRGERVNILKVKIDADQDALVEAAEKLLISAEHPHAEFLKGCVRDSLNRLVLPS
LDREIRRELSDKSENHAVEVFARNLRKLMLQPPVHGKRVLAIDPGFRSGCKAAAIDEFGA
VLDYTLVHVIGREDRCRQGREKLIEMVEKHHVSVIGIGNGAACRETEQLVASMIGKELKD
RDIAYTIVNEAGASVYSTSPIGREELPTFDPVLRSAISIGRRLLDPLSELVKINPANIGV
GMYQHDVKNKQLRETLDGVVESCVNFVGVDVNTASPSLLRYVSGMNQLTARRVFEYRRDH
GPFKSREDFKKVPGFGDATFIQAAGFLRIGDGPNPLDGTWIHPESYELARQVLAKLDTKV
EDLVVAAPVKVKPVFGGDIGLSTDEASAASEAPAPENPAPENPVSEEQPADAEASTPVAE
SSDAVSSEAESSEVSPVEEASTEAPAEAASSETPAAKTPAAETPAVETPVVPAVSMETPA
MKELAKKAAAVEVEALAADLGAGELLLADILTALARRGRDPREDLPPPDFRRGIMKIEDL
SPGMELTGTVLNVVDFGAFVDIGLSDSGLVHISRLADQYVRDPHEVVSVGDVLTVWVVEA
DKANRRVSLSAIEPGAEKPRPQRQPRREKPAGRPGGRKPDSQAPRGGGRNQNAARTQRPS
QPSKRPVKPPKPVKPITKEMLDGKEPMRSFSDLAQLFDKQNDKKKK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatacatctagcattgaccttcaacaagcggccaaagaactacagttgccgctg
gacaaggtcaatcgcacgctggagttgctcgacgagggcaacacggtccccttcattacg
cgctaccgtaaagatcaaacgggcgggcttgatgatgagcaaattcgtgccgtgcaggca
accgtaaaccggttgcgccagctggccgaacggaaaacgacgatactcaaatcgatcgag
tcccaagggagcctcacgcccgaactggaacagcagatcgctcaggcgcgctcgcccaag
ctgctggaagatatctatcttcctttcaagccaaaaaaacagaacctggccgccaccgcc
cggcgtcgcggtctggagccgctggctaaggaaatactcgacggaaccgtgtcgcaagcc
gaccttaccgcccgcatgcaggaatttgtcaacgcagaaacaggactgacttccgtcgaa
gaagttcagcaaggcgtggggcatattattgcggaatggtacagcgaacgggtcgatctg
cggcaggaattgcgtaaacgcctgtggaacgacggtagcctggtctccacacgcatggaa
aacccgccgcctgccgccgtcggcgaagactcggccgacgacgattccctgggggatgac
gacgacccgaccgcagaagattccaccgcagaagattccctggacgacgatgattcgtct
gctggagactctgccgatgaaatcgccttgagcgaagatcaggccgagacgtcggctgag
gaaacggccgttacaccgcccgctcccccggaagcggcagtgagcgatccgacgctggcc
gccggcgccgaagctgaccaggcgatcgaagctgaccaggcgatcgaagcagccaaagcc
ccggccgccgctggcgaatccgacaccccggccgagcccgaaggagaaagcagttccacg
cggcacgccatgtcgtcctcatcggaagacgaaggtgcaaagccgttgaagcgagttccg
ggaacggaagacacccccgcctcggtcgtcggcccttcggaagaagcaagctcgcctgct
cctgaaaacgattcgcctgctcctgtgccggtcgccgccctgagcgaagacgatccgtcc
gcgaaagaagcctccgccgcagaaagcgaagcaaccgttgctgccggctcggaagacgcg
ccagttggcgtagaaggcgaagtcgccgccgaagcaacaccgccagccagcaagccgaaa
ggcgagtccgccggcaaaaagtcgggcagcaagaagaagccgtccaagcagaagcagctg
tcgaagaccgcgatctccaagcagttgcgcaaagacgccaaaaagcgaaagcggcagaag
ctggaaggctcgttcaagaactacttccagttttcacagtcgctggcccagttgccgccg
caccggattctggcgatcaatcgcggcgaacgcgtcaatatcctcaaagtgaaaatcgac
gccgaccaggacgccctggtggaagcggcggagaagttgctgatttcggccgagcatccg
catgcggagttcctcaaaggctgtgtccgcgattcgctgaaccggctggttctgcccagc
ctggatcgggagatacgtcgcgaactgagcgacaagtccgagaaccacgcggtcgaagtg
ttcgcccgtaatttgcgcaagttgatgctgcagccgcccgtccacggcaagcgggtgctg
gcgatcgacccgggttttcgcagtggttgcaaagcggccgcgatcgatgagtttggcgcg
gtgctggattacaccctggtgcatgtgattggtcgtgaagaccgttgccgccagggacgc
gaaaaactgatcgagatggtcgagaagcatcacgtctcggtcatcggtatcggcaacggg
gccgcctgtcgcgagacggagcaactcgtggcgtcgatgatcggcaaggagctgaaagac
cgcgacattgcctatacgatcgtcaacgaagccggcgctagcgtctattcgaccagcccc
atcggacgggaagaactgccgacctttgatccggtgttgcgaagtgcgatttcgatcggc
cgtcgcctgctcgatccgctgtcggaactggtcaaaatcaacccggccaacatcggcgtg
ggcatgtaccagcacgatgtcaaaaacaagcagttgcgggaaacgctcgacggcgtggtc
gaatcgtgcgtgaactttgtcggcgtcgatgtcaacacggccagcccgtcgctgctgcgg
tatgtgtcgggtatgaaccaactgacggctcgccgcgtgtttgaataccgtcgcgatcat
ggcccgttcaagtcgcgcgaagacttcaagaaagtccccggcttcggagacgccaccttc
atccaggcggccggatttttgcgaattggcgatggccctaacccgctcgacggtacctgg
attcacccggaaagttacgagctggctcgccaggttctggcaaagctcgacaccaaggtg
gaagacctggtcgtggcggcgccggtcaaggtgaaaccggtcttcggcggagatatcggt
ctgtcgaccgatgaagcgtccgcggcctcggaagctcccgccccggaaaatcccgccccg
gaaaatcccgtttcggaagagcagcccgccgatgctgaagcgtcgacgcctgtcgccgaa
tcgagcgatgccgtgtccagtgaagccgaatccagcgaagtatctccggtggaagaggca
agcaccgaggctccggccgaagccgcgtcgagcgaaacgcccgctgccaaaacacctgct
gcggaaacgcccgccgtcgaaacacctgtcgttccggccgtgtcgatggaaacgccggcg
atgaaagaactcgccaagaaggcggccgccgtcgaagtggaagcattggctgccgatctg
ggagccggcgaactgttgctggccgacattctgacggccctggcccgccgtggtcgcgac
ccgcgcgaagacctgccgccgcccgacttccgtcgcggcattatgaagatcgaagacctg
tctcccggcatggagctgaccggcacggtgctgaacgtggtcgactttggcgcctttgtc
gatatcggcctgagcgacagcggcctggtgcatatcagtcgactggcggaccagtatgtt
cgcgacccgcacgaagtggtcagcgtgggcgatgtgctcacggtctgggtggtcgaagcg
gacaaggcgaaccgccgcgtatcgctgtctgcgatcgaaccgggcgccgagaaaccgcgt
ccgcaacgtcagccgcgtcgcgagaaaccggctggtcgtcctggcggcagaaagcccgat
tcccaggcgccccgcggcggcggacggaaccagaatgccgcccgcacgcagcgtccttcg
cagccgtccaagcgtcccgtcaaaccgccgaagcccgtcaagccgatcaccaaggagatg
ctcgacgggaaagagccgatgcgttcgttctcggacctggcccagctgtttgacaagcag
aacgataaaaagaaaaagtag
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