Lignipirellula cremea: Pla8534_23000
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Entry
Pla8534_23000 CDS
T06949
Name
(GenBank) photosystem I assembly protein Ycf3
Organism
lcre
Lignipirellula cremea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
CHAT
TPR_1
TPR_7
TPR_2
TPR_8
TPR_16
TPR_MalT
TPR_14
TPR_19
RPN7
TPR_17
DUF2225
TPR_11
Motif
Other DBs
NCBI-ProteinID:
QDU94509
UniProt:
A0A518DRQ0
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Position
3029551..3033585
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AA seq
1344 aa
AA seq
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MQHRITIIILALSGILSTNLCLTVYAQEETPPPRPASEAETDNLRERAQRLIQEGNQLAE
SEKFSAAVAALSEALSILTDQYGQDDGRTREIQVQLAHTRRVAKLTPEQRQQLKQAAMLN
QEAVQNYRERQYQLAAGKSNEVLAIRRQLLGDEDPLTLTSMHNGAMVAANLGDDRKAEEG
FREVTRARLSLFGSGHPSTRDSMERLSSLLARLASQRSERDEFAQALANRREILQLYETL
EGKDHWRVTDARLAVRQVEEMARLPGESRKQLEKAAELDAIALPLYRLGNYEEALVPWNK
ALTIRQRLLGKEHPDTAASLNNLGNLYYVMGKYAEAKPYYQQALEIRAKTLGHRHPQTAL
SLSALGNLYYSMSNYVAGKPYLQQSLEIRTKVLGDRHLATARSLDDLGNLNSAAGDFADA
EPLLEQALEIRRSVLGGEHSLTIQSMRNLANLYKSWGNYLKAEPLYRQLVEIRTKQNDEE
SADFAGALSDLATIYERLGDYDKAEPLYQKCLEIRERVQGEDHPETVTMMLSLGGLYRAM
EDYPRAEPMLQRARKLYEKTLGEEHFRTAEAWNALGLYYKYLGDYRKAEAAYRRSLDIRK
KVWGLESAATAASLNNLAAMYRSTGDYQKGEELARQCLEIREKVLGVDHLHTAMARGQLA
QHFVNDGKYAEAERTYLENLELFRRVLSPDHPHTATCLYRLALVYVKKKEYTKAEPLLQQ
SLAICSRVYGEQSQETAARVSKLASLYASVGDWDQAQAFFRRGLRSTRDILRSAAIVQSE
REQLAMAKSLRYQLDTYLQQVIGHQLNCEDAFREVLAWKGATLVRQRQMRKVAENADVAP
LFHKLQQTASRLATLSRMIPDQQQQAAWRRQLTDLTAEKERLEAELSQKSSKFRQTTKVI
SLEDMLIALPKNAALVDFLEYQQQNPQDDAAEPRFIPSLLAFIVRDNKPIVLLDLGPVAP
LGDAIDTWRRTFGASHDGLAAGRLLRERIWEPVEQHLSGCQLVLLSGDGALGRLPVGALP
GKGEGTYLLEEYRLAMLPVPQLLPALVSELGRKELSGGLLLMGDVDYDADPEAESDQPRR
KSWKRSSTALVRGADLHFSHLDATAGEIATIKEVFADLFQPRPDEIQTLKQTEATEQHFR
EAASKFYNLHLATHGFFADPEKKSALAGEGGDDGPFDEDSEAEHLLRGINPGLLSGLAFS
GANRKPEADKDDGILTADEIASLSLDGVDLVVLSACETGLGQVAGGEGLLGVQRAFQVAG
ARSTVASLWQVGDVATRRLMERFYRNYWEQEMSKLDALREAQLWLLHHPEEIRGDRRVRP
SNDDEPQRLSPQFWAAFQLSGDWR
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcgaataacgatcatcattctcgccctgagcgggattctctccaccaatctt
tgtttaacggtctacgctcaggaggaaacaccaccgccacgaccagccagcgaggcggag
accgacaatctcagggaacgggctcagcgtttgatccaggaaggcaaccaactggcggaa
agtgagaagttttcagcagcggttgctgcgctatcggaagcattgtcaattttgacggat
caatacggccaggacgatgggcggacgcgtgaaatacaggttcaactcgcacacacaagg
cgtgtcgcgaagttgacgcccgagcagcgccagcagttgaaacaggcggcaatgctcaat
caggaggccgttcagaactatagggagcggcagtaccaactggcagcaggcaaatcgaac
gaagtcctggccatccggcgtcaattattgggggacgaagatccgctcaccctgaccagc
atgcacaacggcgccatggtggcggcgaatctgggcgacgaccgcaaagccgaagaaggg
tttcgcgaagtgacccgcgcacggttgtctctcttcggatcgggacatccatcgactcgc
gattccatggaacgcctgtcgagtctgctggcacggcttgcgtcgcagcggtcggaacgc
gacgaatttgctcaagcgctggccaaccgccgtgaaattctgcaattgtacgagacgctc
gaggggaaagatcactggcgcgtgacagacgccagacttgccgtgcgccaagtcgaggaa
atggccaggttgcctggcgaaagtcgaaaacaattagagaaggccgccgaacttgacgcg
attgcgctgccgctttatcgcctgggcaattacgaagaggcacttgttccgtggaacaag
gcgttaacgattcggcagcgcctgttgggcaaggagcatcccgacacggccgcgagcttg
aacaacctgggtaacctctattacgtgatggggaaatacgcggaagccaaaccgtactac
caacaggccctggaaatcagggccaagacgctaggccatcggcatccgcagacggccctg
agcctgagcgccctgggtaacctctattactcgatgagtaactacgttgcaggcaagccg
tacttgcagcaatcgctagaaatcagaacaaaggtcctgggcgatcggcatctggctacc
gccaggagcctggacgacttgggtaatctcaacagcgcggcgggtgacttcgcggatgcc
gagccgctgcttgagcaagcgttggaaatcagaagaagcgtactgggtggagagcattcg
ctgaccatccagagcatgcggaacctcgccaacttgtacaagtcgtggggaaactacctc
aaggccgaaccgctctaccgtcagctggtggaaattcgaacaaagcaaaacgacgaagag
agtgccgactttgccggggctctcagcgatctcgcgacgatctatgaacgtttgggtgat
tacgacaaggcggaaccgctctatcagaaatgtttggaaattcgcgaaagagtgcaaggg
gaagatcacccggaaacagtgacaatgatgctcagcctgggcggcctgtatcgcgccatg
gaggactatccgcgagccgagccgatgctacaacgggcgcggaagctttatgaaaaaaca
ttgggggaagagcattttcgaactgccgaggcctggaatgccctggggctttattacaag
tacctgggcgactatcgcaaggccgaagcggcctatcgccgtagcctcgatatccgaaaa
aaagtgtggggactggagagcgcggctacggccgcttcgctgaacaacctcgcggccatg
tatcggtccacgggcgactatcaaaagggggaagaactggcccgccaatgcctggagatc
cgcgaaaaggtattgggtgttgaccatctgcatacggccatggcgcgtgggcaacttgcc
caacacttcgtcaacgacggcaagtatgcggaggcggaacgaacatatctcgaaaacctg
gaactcttccgccgcgtgctcagccccgatcacccgcacacagcgacttgtttgtaccgc
ctcgcgttggtctacgtcaaaaagaaagagtacacgaaagccgagccattgttgcaacaa
agcttggccatttgcagcagagtgtacggcgagcaaagccaggagaccgccgctcgagtc
agcaaactggcctcgctctatgcatcggtgggcgattgggaccaggctcaagcgtttttt
cgcaggggtttacgatcgactcgcgatatcttgcgatccgcggcgatcgtgcaatcggag
cgtgaacaattagccatggcaaagtcgctacgctatcaattggatacgtatttgcaacaa
gtgatagggcatcagctgaattgcgaagacgcgtttcgcgaagtgctcgcttggaagggg
gcgacgctggtgcgccagcggcaaatgcggaaagtcgcggagaacgccgacgtcgcgccg
ttattccacaagctccagcaaactgccagccgtctcgctactttatcgaggatgattcct
gaccaacagcaacaggccgcctggcggcgccagcttacggatttgacggccgaaaaagag
cgattggaggccgaactgagtcagaagagttcaaagtttcggcagaccacgaaggtaatc
tccctggaagacatgctgatcgcgctgcccaagaatgccgcactcgtcgacttcctggag
taccaacaacagaatccgcaggatgacgctgcagaacctcgattcatccccagtctcttg
gcatttatcgtgcgggacaacaaacccattgtgctgctggacctgggaccggttgcgcct
ctgggcgacgccatcgatacctggcgacgaacgtttggagcctcccacgatggactcgcg
gcgggacgtttgttacgggagcgaatctgggagccagtcgagcagcacctgtcgggctgc
caactggtgcttctctcgggtgatggtgcgctgggacgtttgcctgtcggcgccttgccg
gggaaaggagaaggtacatatcttttagaagaataccgcctggcgatgctgccggtgccg
caacttttacccgccctggtcagtgaattgggccgtaaggagctttccggcgggctgctg
ttgatgggcgacgtggactacgacgccgatccggaggcggaatccgaccagccgcgccgc
aaaagctggaagcggtcgagcacggccctggtccgaggggccgacctgcatttttcgcac
ctcgatgctaccgcaggcgagatcgccacgatcaaagaagtgttcgccgacttgttccag
cccaggccggacgagattcagacgctgaaacaaacggaagccaccgagcaacattttcgc
gaagccgcatccaaattctataacctgcacctggcgacacacggtttcttcgctgacccg
gagaagaagtccgcactggccggcgagggcggcgacgatggcccgtttgacgaggactcg
gaggccgaacatctccttcgcggtattaatccaggattgctttccggtttggcgtttagc
ggcgccaaccgcaaaccggaagcggacaaggacgacggcatcctcaccgcggacgaaatt
gcttcgctcagcctggacggcgtcgatctggtggtgctctcggcgtgcgaaaccggcttg
ggtcaagttgccggcggcgaaggcttgttgggggtacagcgcgcttttcaagtcgccggc
gctcgctcgaccgtcgccagtctttggcaagtaggcgatgtagccacacggcggctgatg
gaacgtttctatcggaactattgggaacaggagatgtcgaagctggacgccctgcgcgaa
gcacagttatggcttctccaccacccggaagaaatccgcggcgatcgccgcgtccgaccc
agcaacgacgacgaaccccaacgcctgtcaccgcaattctgggcggcgttccaactgagc
ggcgactggaggtaa
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