Lignipirellula cremea: Pla8534_33370
Help
Entry
Pla8534_33370 CDS
T06949
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcre03019
]
Pla8534_33370 (yhaM_1)
Messenger RNA biogenesis [BR:
lcre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pla8534_33370 (yhaM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
tRNA_anti_2
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QDU95522
UniProt:
A0A518DUK8
LinkDB
All DBs
Position
complement(4437587..4438588)
Genome browser
AA seq
333 aa
AA seq
DB search
MVRRFINQLGEREAVDEVFLVAEKQLRANRNGNLYLQMRLSDKSGSLTAMLWNATDQIYS
RFDNGDYLRVQGTVQLYNGAMQMIVNKFEQEPTSEIDEADFITLAAAQVDRLASRVGEML
RSMQNLSLRNLAECFLMDDSFMSRFTKAPAGVKNHHAYHGGLLEHVASLMELVTLVAPRY
PELDPDLLLMGAFLHDLGKIDELTYERDLGYSDEGQLIGHLVIGVELLNGKIREAENLAG
EPFPRPLALHLKHLIVSHHGEYAFGSPKLPMSLEAVALHHLDNLDAKIHSLGQIIRDDAN
TDSNWTPYQAALGRKLYKGALVENETGDAETEE
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggtccgtcgctttattaatcagctgggcgagcgcgaagccgtcgacgaagttttcctg
gtcgcggagaagcagttacgcgcaaatcgcaatggcaatctctacctccagatgcgattg
tccgacaaaagcggctccctgaccgccatgctctggaacgccacggaccagatctacagc
cggtttgataacggcgactatctccgggtgcagggcacggtgcagctttacaacggcgcc
atgcagatgatcgtcaacaagttcgagcaggagccgacctccgaaatcgacgaagccgac
ttcatcacgctggccgcggcgcaagtcgaccgcctggcctcccgcgtgggcgaaatgctc
cgctccatgcagaacctgtcgctgcggaacctggcggagtgcttcctgatggacgactcc
tttatgagccgcttcaccaaggcgcccgctggcgtcaagaatcaccacgcataccacggc
ggactgctggagcatgtcgccagcctgatggaactggttacgctggtcgcgccgcgttat
cccgaactcgatcccgacctgctgctgatgggcgccttcctgcacgacctgggaaagatc
gacgaactcacctacgaacgcgacctgggttacagcgacgaaggccagttgatcggccat
ctggtgattggcgtggaactgctcaacggcaagatccgggaagccgaaaacctcgctggc
gaaccgttcccgcggcccctggcgttgcacctgaaacatctgatcgtgagccatcacggc
gagtacgcctttggcagccccaaactgcccatgtcgctcgaggcggtcgccctgcaccat
ctggacaacctcgacgccaagatccactcactgggtcagatcattcgcgacgacgccaac
accgacagcaactggaccccttaccaggccgccctgggccgcaagttatacaaaggcgcc
ctggtcgaaaacgaaacaggcgacgcagagacggaagaatag
DBGET
integrated database retrieval system
