Lignipirellula cremea: Pla8534_33840
Help
Entry
Pla8534_33840 CDS
T06949
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pla8534_33840 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcre03019
]
Pla8534_33840 (recQ_2)
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_33840 (recQ_2)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla8534_33840 (recQ_2)
Messenger RNA biogenesis [BR:
lcre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Pla8534_33840 (recQ_2)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Pla8534_33840 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Peptidase_U32
EccE
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QDU95568
UniProt:
A0A518DUR6
LinkDB
All DBs
Position
complement(4503224..4505167)
Genome browser
AA seq
647 aa
AA seq
DB search
MDLEQVLLDQFGHSQFMPGQKKTISALMGGHSAAAVFPTGGGKSLCYQLPAVLLPGLTVV
VSPLIALMKDQIDALKRRGVAAQKIDSTLTSGEYQQTMQDLRSGALKLLYAAPERFANER
FRETLLQHKISLFAVDEAHCISEWGHNFRPDYLKLAGFAAQCKAERILALTATATPAVLN
DMCRVFQIAPENAVCTGFYRPNLTLLAESVSGAGRDTLLLQKLRERPVGPTIVYVTLQRT
AMEVASRLQRAGLPAKAYHAGMDTADRTQVQEWFMESDDAIVAATIAFGMGVDKANIRYV
YHYNLPKSLENYSQEIGRAGRDGNPSVCDVLACADDLNTLENFVYGDTPSGTAIDGLIRS
IFAQPEDFDVSLYELARDHDLKQIIVRTLLTYLELDGYLEGGTPVVTLFKFQPHVPSKKM
LEGFDADRQTFLQNLFRQAKKGKTWFTLDVAAAAEKLQQPREKLIRTLDYLAEKGLMTVK
TEGVRLRFRRLKSPDSLADLIEDLHHRMTDFEDREIERLQQVVEFIEAEDCRTNRLCEHF
GEERREGCGHCSVCLDQAPVRLPDRDAGSIPESLAGRLGALPPDSKRILKEPVTLSRFLC
GVTSPAFTKAKLSSNELFGVLSSTPYPRIREFAEQLLQRKRGSSGPA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggatctggaacaggtgctgcttgaccagtttggacacagccagttcatgccgggacaa
aaaaagacgatctccgccctgatgggagggcattcggcggccgccgtgtttcccaccggc
ggcggaaagtcgctgtgctatcagttgccggccgtcctgctgcctggactgacggtcgtc
gtctccccgctgatcgccttgatgaaggaccagatcgatgccctgaagcggcgcggcgtc
gctgcgcaaaagatcgactccacgctgaccagcggcgaataccagcaaacgatgcaggac
ctgcgatccggcgcgctcaagctgttatacgcggcgccggagcggttcgccaacgagcga
tttcgcgaaacgctgctgcagcacaagatttctttgttcgcagtcgatgaagcgcactgc
atctcggaatggggccataactttcggcccgactacctcaaactggcgggttttgcggcc
cagtgcaaagcggaacggatcctggccctcacggcgaccgcgacgccggcggtgttgaac
gatatgtgccgcgtgttccagattgcgccggaaaacgccgtctgcaccggcttttatcgg
cccaatttgacgctgctggccgagtccgtttccggggccgggcgagatactctgctgctg
cagaagctccgcgagcgccccgtcggtcccacgattgtctacgtcaccttgcagcggacg
gcgatggaagtcgcctcccggctgcagcgggccggactgccggccaaggcgtatcacgcg
gggatggatacggccgaccgcacccaggtgcaggaatggttcatggagtcagacgacgca
atcgtggcggcgacgattgcctttgggatgggagtcgacaaagcgaacatccgttatgtc
tatcattacaacctgcccaagagcctggagaactactcgcaggagatcggccgcgccggt
cgggatggaaacccctcagtctgcgatgtgctggcctgcgctgacgacctgaacacgctg
gagaactttgtctatggcgatacgccttcgggaaccgcgatcgacggtctgattcgcagt
attttcgcccagccggaagactttgatgtgagcctgtacgagctggcccgcgaccacgat
ctgaaacagattatcgtgaggacgctgctcacctacctggagctggacggctacctggaa
ggcggcacgccggtggtgacgctcttcaaattccagccgcacgtgccgtcgaaaaaaatg
ctggaagggtttgacgccgaccggcaaaccttcctgcagaacctgttccgccaggccaaa
aaaggaaaaacctggttcacgctggatgtggcggccgcggcagagaagctgcagcagccg
cgcgagaagttgatccgcacgctggattacctggcggaaaaagggctgatgacggtcaag
accgaaggcgttcgcctgcggttccgccggctgaagtcgcccgactcgctggccgacctg
attgaggacctgcatcatcggatgaccgattttgaggatcgcgagatcgaacgtctgcag
caggtggtggagttcatcgaggccgaagactgccgcaccaaccggctgtgcgagcacttt
ggcgaagaacgccgcgaaggctgcggccactgctccgtctgcctggaccaggccccggtg
cggctgccggatcgcgacgccgggagcataccggaatcgctggcaggccgattgggcgcg
ttgccgccggacagcaagcgaatcctgaaagagccggtgaccctgtcccgctttttatgc
ggggtgacgtcgccggcgtttaccaaagccaaactcagctcaaacgagctgtttggcgtg
ttatcgtcgacgccttacccgcggattcgggagtttgctgagcagttgctgcagcggaaa
cgaggctcaagcggaccggcatag
DBGET
integrated database retrieval system
