Lignipirellula cremea: Pla8534_34340
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Entry
Pla8534_34340 CDS
T06949
Symbol
rexB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_34340 (rexB)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla8534_34340 (rexB)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Pla8534_34340 (rexB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDU95618
UniProt:
A0A518DUW5
LinkDB
All DBs
Position
complement(4568086..4570887)
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AA seq
933 aa
AA seq
DB search
MPIQRVFLELDRPALHAAATYLTRQFLKNELIDLSGVIVITPSARAGRRLIELLIQSAED
QHLRLLPPEIDTIGSLPERLYHPRLPLAGELVQQFAWAKSLRMMDRDALRPLIPEPPEER
DLARWRDLGELIRRQHVDLAADGLDFADVAQTLEQESPAEAARWQALHQAQQRYHRLLDA
EEVWDAQSARLQAIRDKECTTDRRIVLLAVADMNRAMKQMLEQVADQVTTLVYAWEAWAD
RFDEFGCLEPTAWETPHLPIRTDQVLLAENAASQVEQTVHRIASWEGRYAAEEITIGAPD
TALVQRLESQFEQYGLPVRFGPGRPLAELGPYRLLAAVGDFLERERFADFAALVRHPDVS
AWIDRQGAEEETPDWLPAVDDYFNEHLPLRLGDAWLGEEAAHERIQAVYSLLQEATQELR
GDEEERVRRLDQWTAPLTHLLLRIYEGREFDRSVPADRWTLLSCERIHRSLLDHQNMPAS
LAPSMTAAEAIRLTLSELSGERLAEPNDSAAIEIVGWLDLPLDDAPALIVTSFNEPFVPR
SVAGDLFLPNTLRSELGLDDNLRRYARDAYAVSVLAGSQRDLTYIVARRDSEGSPLLPTR
LLFAADDETVVQRALAFFQPQPPTPRQPLAGRLTGPLEHPNFPIPQPDPSRWHNRALSPT
AFRTYISCPYRFYLKHVLRLSPASDEAEELDGGMFGTLAHAVLEKFGESDMRDSCNADQI
TEMLRQYLVECAADLVGEHPLTPVAVQIEQLRSRLDVYAQVQADWAAQGWRILHTEVPGL
QQPMQFDVDGTPQRIHGYIDRIDQHQTTGELAILDYKTSDAGKSPEKVHRKSSGEWIDLQ
LPLYRHLAQSIGLHGPFRMAYILLPKDTRNIGFSWAEWTAGELETADETAREVIRNIRAG
KFWPPTDPPPDFSEDFAAICQDNVFDRWQEVQS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccagcgtgtttttcttgagctcgatcgtcccgctttgcatgcggccgcgacg
tacctcacccgtcaatttctaaagaacgaactcatcgacctgagcggcgtgatcgtcatc
acccccagcgcccgggccggtcgtcggctgattgaattgctgattcaatcggccgaggat
cagcacctgcggctgctgccgccagagatcgatacgatcggctcgctgccagagcggctg
tatcacccccgcttgccgctggcaggcgagctggtccagcagttcgcctgggcgaaatcc
ttgcggatgatggaccgcgacgcactccggccgctgattcccgaaccgccggaagaacgc
gaccttgcccgctggcgggacctgggcgagctgattcgccggcagcatgtcgaccttgcc
gccgacggcctggactttgccgatgtcgcccagacgctggaacaggaaagcccggccgaa
gcggcccgctggcaggctctgcatcaggcccagcagcgctatcaccgtctgctcgacgcc
gaagaagtctgggacgcccagtccgcccgactccaggcaatccgcgacaaggagtgcacg
accgatcgacgcatcgtcctgctggcggtggccgacatgaaccgggccatgaaacagatg
ctggaacaggtcgccgaccaggtcacgacgctggtctatgcctgggaggcctgggccgat
cgcttcgacgagttcggctgcctcgagccgaccgcctgggagacgccgcacctgccgatc
cgcacggaccaggtgctgctggcggagaacgccgcgtcgcaggtggaacaaaccgtccac
cgcatcgccagctgggaaggccgctatgcggcggaagagatcaccatcggcgcccctgat
acggccctggtgcagcggctggaaagccagtttgaacagtacggcctgccggtccgcttt
ggtcccggtcggccgctggcggagctcggcccgtatcgactgctggcggcggttggcgac
tttctggaacgggagcggttcgccgattttgccgcgctcgtgcggcatcccgatgtttcg
gcctggatcgaccggcaaggcgccgaggaagaaacgcccgactggctgccggccgtcgat
gactatttcaacgagcatctgccgctccgcctgggcgacgcctggctgggggaagaagcc
gcacacgagcgaatccaggccgtctacagcctgctgcaggaagcgacccaggagctgcgc
ggcgacgaggaagagcgcgtccgacggcttgatcaatggacggccccgctgacccatctg
ctgctccgcatctacgagggacgggagtttgaccgcagcgtgccggccgatcgctggacg
ctgctatcgtgcgagcggattcatcgctccctgctggaccaccagaacatgccggcctcg
ctggccccttcgatgacggcggcggaagcgatccgcctcacgctgagcgagctcagcggc
gaacggctggcggaaccgaacgactcggccgccatcgagatcgtcggctggctcgacctg
ccgctcgacgacgcgccggccctgatcgtcaccagttttaatgagccgttcgtcccccgc
tccgtcgccggcgacctgttcctgcccaatacgctgcgcagtgaactgggcctcgacgac
aacctgcggaggtacgcccgcgacgcctacgccgtgagcgtgctggccggatcgcagcgc
gacctgacctacattgtggcccgccgcgacagcgaaggctccccgctgctgccgacccga
ttgctcttcgctgccgacgacgaaacggtcgtgcaaagggcgctggcgttcttccagccg
cagccgcccacgccccgccagccgctggccggccgcctgaccggaccgctggagcatccc
aactttccgatcccgcagccggatccgtcccgctggcacaaccgagccctcagcccgacg
gcgtttcgcacttatatttcctgcccctaccgcttctatctgaaacatgtgctccgtttg
agtcccgcttccgacgaggcggaagagctcgacggcggtatgttcggcacgctggcccac
gccgtgctggagaagtttggcgagtccgacatgcgcgattcgtgcaacgccgaccagatt
accgaaatgctgcggcagtacctggtggagtgcgccgccgatctggttggcgaacatccg
ctcactccggtcgccgtacagattgaacagctccgctcccgtctggatgtgtacgcccag
gtgcaggccgactgggccgcccagggttggcggatccttcatacagaagtgcccggcctg
cagcagccgatgcagttcgatgtcgatggaacgccgcagcggattcacggctatatcgat
cggatcgatcagcatcagaccaccggcgagctggcgatcctcgactataagacgtccgac
gccggcaagtcgcctgagaaggtccaccgcaagtcgtcgggcgaatggatcgacctgcag
ctgcccttgtatcgccatctggcgcaaagcatcggcctgcacggtccgttccgcatggcc
tatatcctgctgccgaaagatacgcgaaacatcggcttctcctgggccgaatggaccgcc
ggcgagctggaaacggccgacgaaacagcccgcgaagtgattcgcaacattcgcgccggg
aagttctggccgccgaccgatccgccgccggacttctccgaagactttgcggccatttgc
caggacaacgtgttcgatcgctggcaggaggtgcagtcatga
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