Lignipirellula cremea: Pla8534_34550
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Entry
Pla8534_34550 CDS
T06949
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcre03032
]
Pla8534_34550 (topA)
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_34550 (topA)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Pla8534_34550 (topA)
DNA replication proteins [BR:
lcre03032
]
Prokaryotic type
DNA Topoisomerases
Pla8534_34550 (topA)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pla8534_34550 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDU95639
UniProt:
A0A518DUY2
LinkDB
All DBs
Position
complement(4600912..4603626)
Genome browser
AA seq
904 aa
AA seq
DB search
MAKQGKEQGKALVIVESPNKAKTISKFLGDEYLVEASVGHVRDLAGNKKDVPAEYQNEDW
AYLAVNVNDEFKPFYIVNSDKKKEVKRLKDMLKESDRLYLATDEDREGEAISWHLSEILK
PTVPVHRLVFHEITKEAIDNALANPRQIDNDLVRAQETRRILDRLYGYDLSDVVRRGVGG
KARSAGRVQSVALRLVVEQERERRAFVSAVYWDLVGTFVKSEQSPFEATLRLVEGKKIPN
SKDFDEKTGKVKDPNLLLLDEAGANQLAERIRNSEFKVTSLEERPFTDRPKAPFITTALI
AEANRKFGFSSKRTMSAAQSLYQKGHITYMRTDSTTLASVAVDAARDLVRSEYGPNFLPE
KPNTYANKVKNAQEAHEAIRPAGHPFELPDALRNELSVDEFKLFELIWKRTIASQMLPAR
GRNITLTLEGGGAVFVATGKIIDFAGHLRAYVEGSDEPEAELADKERILPNVVQGDILDC
RKLDSKSHATQPPRRYTEASLTEELESRGIGRPSTYAAIIETLLERKYVYLKGKALVPQW
VAFSVIRLLEEHFPHLVNYDFTAQMENSLDTISRGEADHVPYLNDFYHGLQGGGGGLKDQ
VKAKLEEVNISEINRFSLGAPEGDKGEVILRVWKDSATVEQDGRRTTVPDAIAPDELTMA
RALELLEQSEKAEEPLGFTEDKRPIFLKMGRFGPYIQLAAENEDEKPKNASLLKGMEPDS
IDLETALKLLSLPRDLGEHPELKERVLAANGPYGPYIRAGKENRKLPDTLSPLDVTMEQA
IELLKQPKSTRGRQQREALRTFDPSPITENPVTVIDGRYGPYISDGETNAPLPKGVSTEE
LTFEQALHELAERAARGGPKKKKKAAKKKASAKKSVKKAAAKKKATKKKTAKKAFKKKAA
KKTS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacagggaaaagaacaaggtaaggccctggtgattgtggaatcgccgaataag
gccaaaaccatctccaaatttctcggcgacgagtatctggtggaggccagcgtcggccac
gtgcgcgacctcgccggcaacaagaaagacgtcccggctgaataccagaacgaagactgg
gcctatctggccgtcaacgtcaatgatgaattcaaacccttttacattgtcaacagcgac
aagaaaaaggaagtcaaacgcctcaaagacatgctgaaagagtccgatcgactctatctg
gcaacggacgaggaccgcgaaggagaggcgatcagctggcacctgtcggaaattctcaag
ccgaccgtgcctgtccaccggctcgtttttcacgaaatcaccaaagaagcgatcgacaac
gccctggccaatcctcgccagatcgataacgacctggtgcgcgcccaggaaacccgccgc
atcctggatcgcctgtacggatacgatctgtccgatgtcgtccgtcgcggcgtgggcggc
aaagcccgttccgccggccgcgtgcaatcggtcgccctgcggctggtcgtcgaacaggaa
agggaacgcagggcgtttgtttcggccgtctactgggatctggtcggcactttcgtcaag
tccgagcaatccccgtttgaagcaaccttgcggctggttgaagggaagaaaatccccaac
agcaaggacttcgacgaaaagacgggcaaggtcaaagaccccaacctgctgctgctggat
gaagccggcgccaatcagctggcggaacggatccgcaactccgagttcaaagttacttcg
ctggaagagcgtcccttcaccgatcgccccaaagcgccctttattacaaccgccctgatc
gccgaggcgaaccgcaagttcggcttcagctccaagcggacaatgagcgcggcccagagc
ctctatcaaaagggccatattacctacatgcgtaccgactcgaccacgctggcctccgtc
gcggtcgacgccgcccgggatctggtacggtccgagtacggccccaactttctgcccgaa
aagcccaacacttacgccaacaaagtcaaaaacgcgcaggaggctcacgaggccatccgc
cccgccggccatccctttgagctgcccgacgccctgcggaacgagctgagcgtcgatgag
ttcaaactgttcgagctgatctggaagcgcaccatcgccagccagatgctgcccgcccgc
ggacgcaatatcaccctgaccctcgaaggcggcggcgccgtattcgtcgccacgggaaaa
atcatcgacttcgcgggccacctcagggcgtatgtcgaaggctccgacgaaccggaagcg
gaactggcggacaaagaacgcatcctgccgaacgtcgtccaaggcgacattcttgattgc
cgcaagctcgactccaaaagccacgccacgcagccgcctcgccggtatacggaagccagc
ctgaccgaagagctggaaagccgcggcatcggtcgtcccagtacgtacgccgcgattatc
gagacgctgctggagcgaaagtacgtttatctcaaagggaaagccctcgtcccgcagtgg
gtggccttctccgtgattcggctgctcgaagagcactttccccatctggtcaactacgac
ttcaccgcccagatggagaactccctcgacaccatcagccgcggcgaggccgaccatgtg
ccttacctgaacgacttctaccatggcctgcagggcggcggcggcggactgaaagaccag
gtcaaagcaaagctcgaggaagtcaacatttcggagattaatcgcttctcgctcggagcg
cccgagggcgacaaaggcgaagtgatcctgcgcgtgtggaaggactcggccaccgtcgaa
caggatggccgccggaccaccgtgcccgacgccatcgcgcccgacgaactcaccatggcc
agggcgctggaactgctggagcaatccgaaaaagcagaagagccgcttggtttcaccgag
gacaaacgtcccattttcctcaaaatgggacgctttggcccgtacatccagttggccgcg
gaaaacgaagacgaaaagccgaaaaacgcttccctcctcaaagggatggaaccggattcg
atcgatctggaaacggccctcaagctgctctccctgccgcgagacctgggcgaacacccg
gaactgaaggaacgggtgctggccgccaatggcccctacgggccttacattcgcgccggg
aaagagaaccgcaaactgcccgacaccctgtccccgcttgatgtcaccatggagcaggcg
atcgaactgctcaagcagcccaaatcgacccgcggccgccagcaacgggaagccttgcgg
accttcgatccttcgcccatcacggaaaatcctgtcacggtcatcgacggtcgttacggt
ccttatatctccgacggcgaaaccaatgccccgctgcccaaaggcgtttcgaccgaagag
ctgaccttcgaacaggcccttcacgagctggccgaaagagccgcccggggcggcccgaaa
aagaaaaagaaggccgccaaaaagaaagcctcggctaaaaagtcggtcaagaaagctgct
gccaaaaagaaggcgaccaaaaagaaaacggccaaaaaagccttcaaaaagaaggccgcc
aagaaaacgtcgtaa
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