Lignipirellula cremea: Pla8534_34640
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Entry
Pla8534_34640 CDS
T06949
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre00020
Citrate cycle (TCA cycle)
lcre00190
Oxidative phosphorylation
lcre00650
Butanoate metabolism
lcre00720
Other carbon fixation pathways
lcre01100
Metabolic pathways
lcre01110
Biosynthesis of secondary metabolites
lcre01120
Microbial metabolism in diverse environments
lcre01200
Carbon metabolism
Module
lcre_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lcre_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lcre_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Pla8534_34640 (frdA)
00650 Butanoate metabolism
Pla8534_34640 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Pla8534_34640 (frdA)
00720 Other carbon fixation pathways
Pla8534_34640 (frdA)
Enzymes [BR:
lcre01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Pla8534_34640 (frdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
NAD_binding_8
HI0933_like
DAO
AlaDh_PNT_C
FAD_binding_3
Pyr_redox
Thi4
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QDU95648
UniProt:
A0A518DUZ1
LinkDB
All DBs
Position
4617247..4619226
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AA seq
659 aa
AA seq
DB search
MAKQRVMIVGGGLAGLSAAMKLAELDIDVDLMSLAPVKRSHSVCAQGGINSVNDQTRQLG
DDEWKHFDDTVYGGDFLNHQPPVKEMCYWAPKVIELMDRLGVTFNRTPEGFIDRRRFGGT
LYKRTAFAGATTGQQLLYALDEQVRRYESEGKITKYEFWDFLGPLLDDNGVCRGAVGQDL
VSMEIRSFPADALIIASGGPGLVYGRSTMSMACTGSAVSRCFQDGAKYGNGEFIQVHPTA
VPGADKLRLMSESARGEGGRVWVPRKAHDGRNPMEIPEADRYYFLEERYPEYGNLVPRDI
ATREIFDICVNEGLSVDPERSCVYLDLTHISRAELDRKLGGILAIYEKFQGDDPRETPMK
IFPAVHYSMGGLWVDYERTAAGGLRPGSIANQATNIPNMYAIGECDYQYHGGNRLGANSL
LSCIFSGLFVAPCIENLLSTSPHGTAAEQPSSVYANARRQHQQRHNALLKRDAGRENPYL
IHQELGNVMTRTATVVRRNDQLEEGYAKVEELHERAEHCSLSDTGGWTNQNVVFTKALLD
MFPLAKSILKGALQRDECRGAHYKPNFSMPPLTAEDPVERRREAEAWCDRFAANTDKWLK
STIAVWDGNEPQITYEEIDTSLIPPRPRLYGLVGADVIDKVWKERQAASGKQEAKAAAH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaacgggtgatgattgtaggcggcggactggcgggactttcagccgccatg
aagctggccgaactcgacatcgacgtcgatctcatgagcctcgcgcccgtcaaacgttcg
catagcgtttgcgcccagggcggcatcaacagcgtcaacgatcaaacgcgccaattgggc
gacgacgagtggaagcacttcgatgacaccgtctacggcggcgactttttgaaccaccag
ccgcccgtcaaggaaatgtgctactgggcccccaaggtgatcgagctgatggatcgcctg
ggcgtgaccttcaaccgcacgccggaaggcttcatcgatcgtcgccggttcggcggcacg
ctctacaaacggaccgcctttgcgggtgcgaccaccggacagcaactgctgtatgctctg
gacgaacaggttcgccggtacgagagcgaagggaagatcaccaagtacgagttctgggat
tttctcggcccgctgctcgacgacaacggcgtttgtcgcggcgctgtcggccaggatctg
gtctccatggagatccgctccttcccggccgacgcgctgatcatcgcttcgggcggtccc
ggactggtttacggccggtcgaccatgtcgatggcgtgcacgggtagcgcggttagtcgc
tgtttccaggacggcgccaaatacggcaacggcgagtttatccaggtccatccgaccgct
gtccccggcgccgacaagctgcgcctgatgagcgaatcggcccgcggcgaaggcggccgt
gtgtgggtgccccgcaaggcgcacgacggccgcaatccaatggaaatcccggaagccgat
cgttactacttcctggaagaacgttaccccgaatacggcaacctggtgccacgcgatatc
gccacgcgggaaatctttgatatctgcgtgaacgaagggctcagcgtcgatccggaacgc
agttgcgtgtacctggatttgacccatatctcccgtgcggaactcgatcgcaaactggga
ggcatcctggccatctacgagaagttccagggcgatgaccctcgcgaaacgccgatgaaa
atcttcccggccgttcattattccatgggcggactctgggtcgactacgaacggaccgct
gcgggcggcctgcggccgggctcgatcgccaaccaggcgaccaacatccccaacatgtac
gccattggcgagtgcgactaccagtaccacggcggcaatcgtctgggcgccaactccctg
ctgagctgcattttcagtggtctgttcgtcgctccctgcatcgaaaatctgctgtcgacc
tccccgcatggtacggccgccgagcagccttcgtcggtctacgccaacgcccgccggcag
caccagcagcgccacaatgctttgctcaaacgcgatgcgggacgtgagaacccgtacctg
attcaccaggaactgggcaacgtgatgacgcgcacggccaccgtggtgcggcggaacgac
cagctggaagaaggctacgccaaagtggaagaactgcacgagcgggccgagcattgctcg
ctgtcggacaccggcggctggaccaaccagaatgtggtgttcaccaaggccttgctggat
atgttcccgctggccaagtcgattctcaaaggcgccctgcaacgcgatgagtgccgcggc
gcccactacaaaccgaatttctcgatgcctccgctgacggccgaagatccggtcgaacgg
cgccgcgaagcagaagcctggtgcgatcgcttcgccgccaatacggacaaatggttgaag
tcaaccatcgccgtgtgggacggtaacgaaccgcagatcacttacgaagagattgatact
tcgctcattccgccgcggcctcggctgtatggtctggtcggcgccgatgtgatcgacaaa
gtctggaaagagcgacaagctgccagcggcaagcaggaagccaaagccgccgcccactaa
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