Lignipirellula cremea: Pla8534_36710
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Entry
Pla8534_36710 CDS
T06949
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcre03019
]
Pla8534_36710 (yhaM_2)
Messenger RNA biogenesis [BR:
lcre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pla8534_36710 (yhaM_2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
Ppx-GppA_III
Motif
Other DBs
NCBI-ProteinID:
QDU95852
UniProt:
A0A518DVI7
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All DBs
Position
complement(4899850..4900869)
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AA seq
339 aa
AA seq
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MPGKKILPILTLSEMTDGQEADAFVMLAAKEELVTKTGKPYYRVTFRDAGKSLTFPIWND
SLCAEDCRGWSVGQFFKVRSVYRESTYGPQLEIHKVREACDADRADGFDEWMCRPRSQFE
PEEMFAALLAIASDQIADGPLSELVTAILTEHRERLLTMPAAVRNHHAFAGGYLEHVLSV
TRNALMLADKYRTDYPDLQPALSRDLVAAGAILHDIGKLQELEQTPAGARYSPAGELIGH
ILLGRDMVREAAVGRGLDQELQLRLEHMIVSHQRLPEWGSPKPPMTPEALIVHFADDLDA
SFQMMYAALAEDGTANPMTPTNKALRSKVFKGLGSAAEQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaaaaaatcctccccattctgaccctttctgaaatgaccgacggccaggaa
gccgacgcttttgtgatgctggccgccaaggaggagttggtcactaaaacagggaagccc
tactaccgggtgacctttcgcgatgcgggcaagtcgttgacttttcccatctggaacgac
tcgctttgcgctgaagactgccgcggttggagcgtggggcagttcttcaaggtgcggagc
gtataccgcgagtcgacctacggtccccagctggaaatccataaggtgcgcgaagcgtgc
gacgccgaccgggccgacgggtttgacgaatggatgtgtcgtccgaggtcgcagtttgaa
ccggaagaaatgttcgccgcgctgctggcgatcgccagcgaccagatcgccgatggaccg
ctgtcagaacttgtcactgcaatcctgacggaacatcgcgaacgattgctgacgatgccg
gccgccgtgcggaatcaccacgcgttcgccggcggctatctggagcatgtgctcagcgtc
acgcgcaacgccctgatgctggcggacaaatacaggaccgactacccggacctgcagcct
gctttgtcgcgagatctggtcgcggccggggccattctgcacgatatcggcaagctccag
gagttggaacaaacgcctgccggggcccgttattcgcctgcgggcgagctgatcggccat
attcttctaggccgcgacatggtccgcgaggcagcggtcggacgcggcctggaccaggaa
ctgcagctccggctggagcatatgattgtctcccatcagcgtttgccggaatggggttcg
cccaaaccgccgatgacgcccgaagcgctgattgtgcatttcgccgacgatctcgacgct
agttttcaaatgatgtacgccgccctggcggaagacggcaccgccaatccgatgacgccc
accaacaaagcgctccgcagcaaagttttcaaagggctgggcagtgcggccgaacaatag
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