Lignipirellula cremea: Pla8534_39250
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Entry
Pla8534_39250 CDS
T06949
Symbol
sigA_3
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
lcre
Lignipirellula cremea
Pathway
lcre02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Pla8534_39250 (sigA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcre03021
]
Pla8534_39250 (sigA_3)
Transcription machinery [BR:
lcre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Pla8534_39250 (sigA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
HNH_repeat
DUF6819
KORA
Motif
Other DBs
NCBI-ProteinID:
QDU96106
UniProt:
A0A518DW92
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All DBs
Position
complement(5262053..5262952)
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AA seq
299 aa
AA seq
DB search
MSPVSRKPAAPRRKAATPVRSRKSDALQTPLETYLREINETSLLSAKEEQELAGQIADGD
VRARDRMVRANLRLVVNIARGYTGKGLGLQDLIEEGNLGLLRAVEGFDPGMGTRFSTYAS
YWIKQSIKRALINSAKTIRIPAYMVELLSKWRRASARLNEELGRTPTPEEVARVLGLPKK
KLPIIKKAIRIYNSTPQTDQSESGLSLGEMIMDERMKSPEEELVEHDVLGHVMRMMKNMD
EREATVLRMRFGLDEHEPHTLKEIGEQLGLTRERVRQIETEALNKLGEGLKDPRERMEA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccgttagccgcaagcccgccgccccccgtcgcaaagcggcgacgcctgtccgg
agtcgcaagtccgacgccctgcagacgccgctggaaacctatcttcgcgagatcaatgaa
acttccctcctgtccgccaaggaggagcaggaattggccggccagatcgccgatggcgac
gtccgcgctcgggaccgcatggtccgcgccaacctgcgactggtcgttaacattgctcga
ggatataccggcaaaggtcttggcctgcaggacctgatcgaagaaggcaacctcggcctg
ttgcgggcggtcgaaggttttgaccccggcatgggcacccgcttcagcacctacgccagc
tactggatcaagcagtcgatcaaacgggctttgatcaactcggctaaaacgattcgtatt
ccggcctacatggtcgaactcttgtcgaagtggcgccgcgccagcgcccggctgaacgaa
gagctgggccgcacgcccacgccggaggaagtcgcccgggtgttaggcctgccgaagaag
aagctgccgatcatcaaaaaggcgatccgcatttataactccacgccgcaaaccgaccag
tccgagtcaggactgtcgctgggcgaaatgattatggatgagcggatgaaaagccctgag
gaggagctggtcgaacacgacgtgctgggccatgtgatgcgaatgatgaaaaacatggac
gagcgcgaagcgaccgttctgcggatgcggttcggcctcgatgaacacgagccgcacacg
ctgaaagagatcggcgagcaactcggactgacgcgggaacgtgtccgccagatcgagacc
gaagcgctcaacaagctgggcgaagggctgaaagatccgcgcgaacggatggaagcctaa
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