Lignipirellula cremea: Pla8534_39290
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Entry
Pla8534_39290 CDS
T06949
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03030
DNA replication
lcre03430
Mismatch repair
lcre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pla8534_39290 (dnaE)
03430 Mismatch repair
Pla8534_39290 (dnaE)
03440 Homologous recombination
Pla8534_39290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcre03032
]
Pla8534_39290 (dnaE)
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_39290 (dnaE)
Enzymes [BR:
lcre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pla8534_39290 (dnaE)
DNA replication proteins [BR:
lcre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pla8534_39290 (dnaE)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pla8534_39290 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
PHP_C
HHH_3
NNH3
Motif
Other DBs
NCBI-ProteinID:
QDU96110
UniProt:
A0A518DW96
LinkDB
All DBs
Position
5267929..5271498
Genome browser
AA seq
1189 aa
AA seq
DB search
MSDKKFVHLHCHSHYSLLDGASSIPKLTARAREHGMNALALTDHGNLHGALQFYRACKKE
DLNPILGYEAYIAPGSRFERGASSMKEASYHLTLLAKNRTGFKNLVKLASAASLEGFYFK
PRIDKEILAAHSEGLICLSGCLSSEFSRKILAGSAPDAEFAEACETAAWFEKIFGERYFI
EVMNNGIDLQRVQLEGAVEIAKKMGLPVVATSDCHYINQDDAEAQDVMLCINTGKFRTDQ
SRMKMENDQFFLRSPEEMYRHFPGLEDAVARSQEIADSVDIDLELGSRNFPTYRLPPDRK
PDEYLRETCLAGLRDRYADVPEMWDGDELAEVVIARLDRELGVINKLGFPNYFLIVWDFV
VHARDVGIPATARGSGVGAIVCFALYMSHVCPLKYGLLFERFLDENRLEAPDIDIDFCKE
RRGEVIQYVKDKYGEDNVAQIGTFGTLAARAAIKDVGRALGIPLARVNQVTGMVPEELGI
TLDKALQKSDELKATYEGDGEIRELLDLARKIEGLARNVGTHAAAVVIADKPLTEYVPLG
RVSGKDDIITQWSMNDVEDAGLLKMDFLGLRNLTMLRTSVDLIEQTTGERIDPLKFPLDD
KPTYALLQRGETKGVFQLESGGIRDLLQRMKPDHFNDIIATAALYRPGPLEGGMVDTYVN
VKNKRQEPEYKHEILKSILEETNSVMVYQEQVMQILNRLGGIELAKAYTCIKAISKKKES
LIAQNHEQFIKGAVENGLTKQEAQEFWDMILKFAGYGFNKSHSTAYALIAYQTAYLKAHY
PVEFMASLLTGDIPGRNFKRKDSLVEHLEDCTRMNIEVVFPSVNTSDVLFSVADGKIPFG
LAAIKGCGGSSAEAIVAARQKDGPFKDLFDFCERVDPSACNRSTIETLIKAGAFDCFGAK
RSQLLAVVDRALQAGVSAQADRKSGQRSLFGDIEEEEETKATVSLPDIPETPEREMLVAE
KEVLGFYLRSHPLAEFEKQLRTYCTHTTSNIGGLADRTEIILGGMLSAIKFAHTKNPKPG
APSKYVNFDLEDVDGAIRCIQWPDGFAESGHLIQADAILVVRGVLDRRGGDEANLIVNEL
VPLDQLDAKYTRGIKIRIDEKIHGLGAVKTVREILRGYPGGGEVQLVLCLEEGTRVYVKS
GREGVDMSKEMRARLDDSLGPGNYQTITAPPQVGRSNGNGNGRRYSKKG
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaaagtttgtccatcttcattgccacagccactacagcctgctcgacggc
gccagctcgattcccaagctgacggcccgcgcacgcgagcacggcatgaacgcgctcgcg
ctgaccgaccacggcaatctgcatggagcgttgcagttttatcgcgcgtgcaagaaagaa
gacctgaatccgatcctggggtacgaagcctacatcgcccccggcagccgctttgaacgc
ggcgccagcagcatgaaagaagccagctaccatctgactttgctggccaagaatcggacc
ggtttcaagaacctggtcaagctggcctcggcggcgtcgctggagggcttttacttcaag
ccccgcatcgataaagagatcctggccgcccatagcgagggattaatctgcctcagcggt
tgcctgtcgagcgagttcagccgcaagatcctggccggcagcgcgcccgatgcggagttt
gccgaggcctgcgaaacggccgcctggtttgaaaaaatcttcggtgagcggtacttcatc
gaggtgatgaacaacggcattgatctgcaaagggtgcagctggaaggcgccgtagaaatc
gccaagaaaatggggttgccggtcgtcgccaccagcgactgtcattacatcaaccaggat
gacgccgaggcccaggacgtcatgctgtgcatcaacaccggcaagttccgcaccgatcag
tctcgcatgaaaatggagaacgaccagttctttctccgttcgccggaagaaatgtatcgc
catttccccggcctggaagacgccgttgcccgcagccaggagatcgccgattcggtcgat
atcgacctggaactgggcagccgaaattttcccacctatcgcttgccgccggaccgcaaa
ccggacgaatacctgcgtgaaacttgcctggcgggccttcgcgaccgctatgccgatgtg
ccggaaatgtgggacggcgacgaactggccgaggttgtgattgcacgcctggatcgtgaa
ctaggcgtgatcaacaagctgggctttccaaactactttctgatcgtatgggactttgtc
gtccacgcccgcgatgtcggcattccggcgaccgctcgtggatcgggcgtcggggcgatc
gtctgttttgcgttgtacatgagccatgtctgcccgctcaagtacggcctgctgttcgag
cgattcctggatgagaaccgcctggaagctcctgatatcgacatcgacttttgcaaggag
cgtcgcggcgaggtcatccagtatgtgaaggataaatacggcgaagacaacgtcgcgcag
attggcaccttcggcacgctggcggcccgcgccgccatcaaggacgtcggccgcgccctt
ggcattcctctcgcccgggtgaaccaggtcaccggcatggtgccggaagagctgggcatt
acgctcgacaaagcacttcagaaaagcgacgagctgaaagccacctacgaaggcgacggc
gaaatccgcgagctgctcgacctggcccgcaagatcgaaggcctggcgcgcaacgtcggc
acgcatgccgcggcggtggtgatcgccgacaagccgctgaccgaatacgtgccgctggga
cgcgtcagcggcaaggacgacatcatcacgcaatggtcgatgaacgatgtcgaagacgcc
ggtctgctcaagatggacttcctgggtctccgcaacctgacgatgctgcggacctcggtc
gatctgatcgaacaaaccaccggcgagcgaatcgacccgctgaaattcccgctcgatgac
aagccgacctacgcgctcttgcagcgcggcgaaaccaaaggcgtgttccagctggaaagc
ggcggcatccgcgacctgctgcagcggatgaagcccgaccattttaacgacatcatcgcc
accgccgccctgtatcgcccgggtccgctcgaaggcggtatggtcgacacctacgttaac
gtcaaaaacaaacggcaggagcccgagtacaagcacgaaatcctcaaaagcattctggaa
gagaccaactcggtcatggtctaccaggaacaggtgatgcagatcctgaatcgcctgggc
gggatcgaactggccaaagcgtacacctgcatcaaagcgatcagtaaaaagaaagaatcg
ctgatcgcccagaaccacgagcagtttatcaaaggggccgtggagaacgggctgaccaaa
caggaagcccaggaattctgggacatgatcctgaaattcgccggctacggttttaacaag
tcgcacagtaccgcatacgccctgatcgcctaccagacggcctacctgaaggcccattac
ccggtcgagttcatggcctcgctcctgacgggcgacattccgggccgtaacttcaagcgg
aaagactcactggtcgagcacctggaagactgcacccgcatgaacatcgaggtggttttc
ccctcggtgaacacctccgacgtgttgttcagcgtggccgacggcaagatccccttcggc
ctggccgccatcaagggctgcggcggctcatcggcggaagcgatcgtcgccgcccgccag
aaagacggccctttcaaggacctgtttgatttctgcgaacgggtcgatccctcggcctgc
aaccgctccacgatcgaaacactcatcaaggcgggcgcctttgactgctttggcgccaaa
cggtcgcaactgttagcggttgtcgatcgggctctgcaggcaggcgtttccgcccaggcc
gatcgcaaaagcggccagcggagcctgttcggcgatatcgaagaggaagaagaaacaaaa
gcgaccgtcagcctgcccgacatccccgaaacgcccgaacgggagatgctggtcgccgaa
aaagaggtcctcggcttctacctgcgcagccatcccctggccgagtttgaaaagcagctg
cggacctactgcacgcacaccacgtccaacatcggcggcctggccgatcggaccgagatc
atcctgggcggcatgctctccgcgatcaagttcgcccataccaaaaaccccaagccgggc
gcccccagcaagtacgtcaacttcgacctggaggatgtcgacggcgccatccgctgcatc
cagtggcccgacggctttgccgaaagcggccacctgatccaggccgacgccattctggtc
gtccgcggcgtactcgatcgccgcggcggagacgaagcgaacctgatcgtcaacgaactg
gtcccgctcgaccagcttgacgccaagtacacccgagggatcaaaatccgcatcgacgag
aaaatccacggactgggcgccgtgaaaaccgtccgcgagatcctgcgaggctacccgggc
ggcggcgaggtgcagctggtgctgtgcctggaagaaggcacccgcgtctatgtgaaaagc
ggccgggaaggcgtcgacatgagtaaagagatgcgcgcccgcctcgacgattccctcggt
cccggcaactaccagacgatcaccgccccgccgcaggtcggtcgctccaacggcaacgga
aacggccgccgctacagcaaaaagggctga
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integrated database retrieval system
