Lignipirellula cremea: Pla8534_41780
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Entry
Pla8534_41780 CDS
T06949
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03420
Nucleotide excision repair
lcre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pla8534_41780 (pcrA_1)
03430 Mismatch repair
Pla8534_41780 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_41780 (pcrA_1)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla8534_41780 (pcrA_1)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla8534_41780 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
Pla8534_41780 (pcrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDU96358
UniProt:
A0A518DWZ2
LinkDB
All DBs
Position
5612139..5614148
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AA seq
669 aa
AA seq
DB search
MSHDLNPAQRQAVETLSGPLLVLAGAGTGKTRVVTYRIAALIRSGIAPERILAVTFTNKA
AAEMQERVAKLLGKRKEKPKVSTFHSHCVFILRQHISKLGYPAKFAIYDGGDQESLARTV
LREIRVSNEMMRPGDLLRKISNWKSAAIRPAEAASLAETDKEHLAAMGYRRYQKALKLSG
AVDFDDLLLLTEDLFREHADVREKEAGRFDHLLVDEYQDTNGTQYRIVKALAKDHRNLCV
VGDDDQSIYGWRGAEVEHILKFARDWSDAVEVRLEENYRSTAEILNAANTLIAYNKKRHD
KILRPARAGGEKPRINQHKDETEEAKAVVADIQRLLTDPHWSARDVAVLFRTNEQPRPFE
TEMRRVKIPYVVVGGMSFFDRKEVRDILAYLRLLVMQQDEVSLLRIMNTPARGIGQGSVE
NLMKTAVSQAKTIWEIISNPGLKPQLPAAADKGVNDLVGLIRHFGKLAETSSLVDTARGL
IAKIRYEDEIRRRHPEPNDQESRIAAVEEVVNAIGAYESRSKKPTLAGFLEETALGGREF
DNEKDKQLRRNAVVLMTLHAAKGLEFPHVYMVGMEEGILPHHRAVKLEMESDAIDEERRL
CYVGVTRAQDRLTLSMARTRMKWGKPRETTPSRFLYEIIGKADNAHRIAARSSGSRPTGR
GAARKRPPG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgatctcaatcctgctcaacgccaggccgtggaaacgctcagcggccccctg
ctggtgctcgccggggccggcaccggtaaaacaagggtggtgacctaccgcatcgccgca
ttgatccgcagcggcattgctcccgagcggatcctggccgtaacctttaccaacaaggcg
gcggccgaaatgcaggaacgcgtcgccaaactgctggggaagcggaaggagaaaccgaaa
gtttccaccttccactcccactgcgtgttcatcctgcggcaacacatcagcaagctcggc
tatccggccaaattcgccatctacgacggcggcgaccaggaaagcctggcccgcacggtc
ctgcgggaaattcgcgtctccaatgaaatgatgcggcccggcgatctgctccgtaaaatc
agcaactggaagtcggccgccattcgacctgccgaggctgcttcgctggcagagaccgat
aaagagcatctggccgcgatgggctaccgccgatatcaaaaggccctcaagctttccggc
gccgtggatttcgacgacctgctgctgctgaccgaagacctgtttcgcgaacatgccgac
gtacgcgaaaaagaagccggccggtttgaccatctgctggtcgacgaataccaggacacc
aacggcacccagtaccgcattgtcaaagccctcgccaaagaccaccgcaacctgtgcgtg
gtgggcgacgacgaccagtccatttacggctggcgcggggccgaggtggagcatatcctg
aagttcgcccgggactggtccgatgcggtcgaggtgcgtctggaagagaactaccgctcg
accgccgagattctcaacgcagccaacacgctgattgcctacaacaaaaagcgacacgac
aaaatcctgcggccggcccgggccggcggcgagaagcctcgcatcaaccagcacaaggat
gaaaccgaagaggccaaagccgtcgtcgccgatatccagcgtttgctgaccgatccgcac
tggtcggcccgcgatgtggccgtgctgttccgcaccaacgaacagccccgcccttttgaa
actgaaatgcgccgcgtcaaaatcccgtacgtggtcgtcgggggcatgtcgttctttgac
cggaaagaagttcgcgatatcctggcctatctgcggctgctcgtcatgcagcaggatgaa
gtgtcgctgctccgcattatgaacacgcccgcccgcggcatcggccaggggtcggtcgaa
aacctgatgaagaccgccgtctcccaggccaaaaccatctgggaaatcatcagcaacccc
ggcctgaagccccagctacccgccgccgccgacaagggggtgaacgatctggtcggactg
atccgccatttcggcaagctcgcagaaaccagcagcctggtcgacaccgcccgcggcctc
atcgccaaaatccgctacgaagacgaaatccgccgacgccacccggaaccgaacgaccag
gaatcgcgcatcgccgccgtcgaagaagtcgtcaacgccattggcgcctatgagagccgt
tccaaaaaaccgacgctcgccggcttcctggaagaaacggccctcggcggccgtgagttc
gataacgaaaaagacaaacagctccgccgcaacgccgtggtcctgatgacgctgcacgcc
gccaagggactagaattcccccatgtttatatggtcggtatggaagaaggcatcctgccc
catcatcgggccgtcaagctggagatggagtccgacgccatcgatgaagaacgccgcctg
tgctacgtcggcgtcaccagggcgcaggatcgtctcaccctgtcgatggcccgcacccgg
atgaaatggggcaaacctcgggagacaacccccagccggttcctgtacgaaatcatcggc
aaggccgacaacgcccatcgcatcgccgcccgctccagcggttcccgcccgaccggccgc
ggcgccgcccgcaaaagaccgcccggttag
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