Lignipirellula cremea: Pla8534_41810
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Entry
Pla8534_41810 CDS
T06949
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla8534_41810 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_41810 (alkA)
Enzymes [BR:
lcre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pla8534_41810 (alkA)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pla8534_41810 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
DUF5545
Motif
Other DBs
NCBI-ProteinID:
QDU96361
UniProt:
A0A518DWZ5
LinkDB
All DBs
Position
complement(5616956..5617591)
Genome browser
AA seq
211 aa
AA seq
DB search
MTWKNLPLETAQQHLRSGDPVMAAMMDAVGPFALKLEPNRFGMLVRSIISQQISTAAARS
IRTRVEQHLAPQKITAAGLLACDLEQLRALGLSAQKASYLLDLAEKTEDGTVKLRSIARL
DDEAIIAQLTQVKGIGRWTAQMFLIFALGRLDVFPHDDLGIRSAIRDSYQLNDLPSKQTS
LEIAAPWRPFATIATWYCWRSLDVAKKPKDG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacctggaaaaacctgccgctggagacggcccagcagcatttgcggtcgggcgatccg
gtcatggcggccatgatggacgcggtcgggccgtttgcgctcaagctggagccgaaccgc
tttggcatgctggtccggtcgatcatttcgcagcagatttccaccgctgccgcccggtcg
atccgcacccgggtggagcagcacctggcgccgcaaaagatcacggcggccgggttgctg
gcctgcgatctggaacagctacgtgcgctcggcctgtccgcgcaaaaggccagctacctg
ctggacctggccgagaaaacagaagacggcacggtcaagctccgcagcatcgcccggttg
gacgatgaagcgatcatcgcccagttaacgcaagtgaaagggatcggacgctggacggcc
cagatgttcctgatcttcgcactcggtcgactcgacgtcttcccgcacgacgacctgggc
atccgctccgcgatccgcgattcctatcagctgaacgacctgcccagcaagcagaccagc
ctggagatcgccgccccctggcgtcctttcgccaccatcgccacgtggtactgctggcgg
agtcttgatgtggcgaagaagccgaaggacggataa
DBGET
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