Lignipirellula cremea: Pla8534_42050
Help
Entry
Pla8534_42050 CDS
T06949
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03420
Nucleotide excision repair
lcre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pla8534_42050 (pcrA_2)
03430 Mismatch repair
Pla8534_42050 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_42050 (pcrA_2)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pla8534_42050 (pcrA_2)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pla8534_42050 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Pla8534_42050 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Acetyltransf_1
CarD_TRCF_RID
Tektin
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QDU96385
UniProt:
A0A518DX27
LinkDB
All DBs
Position
5649220..5651550
Genome browser
AA seq
776 aa
AA seq
DB search
MIEKDIYSSLTAPQLAAVQHVDGPLLMLAGPGSGKTRAVTHRIAHLIAQGIPPQQILALT
FTNKAADEMRARLQLLAPHRPVWMGTFHRFCARLLRRYASLAGLQENYSIYDTDDSGKTL
KRTLAEAEVDLTWTRPERIANAISWAKNELITPDRYQPKAGDPLGKVVSEVYPAYQQALL
ASNAVDFDDLLLHVAVMLRENPELRSTLDERYRYIMVDEYQDTNFAQYAIVRALSIDYPN
LAVTGDPDQSIYGWRGASLRNILDFEKDFDNVAVVRLEQNYRSTKAILRVAHELISHNTQ
RKEKDLFTDNPEGEPVALVEYPTHRDEAAQIAHQIAHDITHKGLRPRDVAVFYRVNALSR
TVEQAMVEAGVPFQIVNGHAFYQRKEIKDVLAYLQLLNNPQDDGALLRVINTPPRGIGKT
TLNHLAEHARRHGLTRLEAARECGLIESIKARSRTAIKKFVELIDRLISQAAEPVEAILG
HVLTESGYQDALKGSPLEEDQERLANIEELLTAAREFDAQHEGGLEAYLEQASLVADTDA
FETEVDKVTLMTLHAAKGLEFAHVYLIALEEGLLPHERSRDSPSGMEEERRLLFVGITRA
QERLQISYAMNRNFRGTQWPTVPSSFLMELPRGELKRTESARPRYNEFSQEPEYAEEAWV
EESIDYAEEHVDEYVQEDPEEQAEREKKPSQDRPKINLNSFLMTGADLLEQQKKRAENAL
RFKPGMLVEHAEHGLGVIVALSGGDRNRVATIEFEDEDKQRKFRLSHTDLTLAPKK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgaaaaagatatttactcctcgctgaccgccccgcaactggccgccgtgcagcat
gtggacgggccgctgttgatgctggccggccccggctccggcaaaacgcgggccgtaacg
caccggatcgcccacctaattgctcaggggatcccgccgcagcagatcctggcgcttacg
ttcaccaacaaagccgccgacgaaatgcgggcccggctgcagctgctggctccccatcgt
ccggtctggatgggcacgttccatcgcttctgcgcccggctgctccggcggtatgcatcg
ctggcgggactgcaggaaaactactccatctacgataccgacgacagtggcaaaacactt
aaacgcacgctggcggaggccgaagtcgatctcacctggacgcggccggaacggatcgcc
aatgcgatcagctgggccaaaaacgaactgatcacgccggaccgctaccagccgaaagca
ggcgatccgctgggcaaggtcgtctccgaagtttacccggcctaccagcaggccctgctg
gcatccaacgcggtcgactttgacgatctgctgctgcatgtggccgtcatgctgcgcgaa
aatccagaactgcgctcgacgctggatgagcgctatcgctacatcatggtcgatgagtac
caggacaccaacttcgcccagtatgcaatcgtcagggcgttatccatcgactatcccaac
ctggccgtcaccggcgatccggaccagtccatctacggctggcggggcgccagcctgcgg
aacattctcgactttgaaaaggacttcgataacgtcgccgtggtccggctggagcaaaac
taccgcagcaccaaggcgatcctgcgcgtcgcccatgagctgatctcgcacaacacgcag
cggaaagaaaaggacctgttcaccgacaacccagaaggcgaaccggtcgcgctggtcgag
taccccacgcaccgcgacgaagcagcccagattgcccatcagatcgcccacgacatcacc
cacaagggactgcgtccccgcgatgtggccgtgttctatcgggtgaacgccctgtcccgc
acggttgaacaggcgatggtcgaggcgggcgtcccctttcagattgtgaacgggcacgcc
ttttaccagcggaaggaaatcaaagatgtgctggcctatctgcagttgctgaacaacccg
caggacgacggcgctctgctccgcgttatcaatacgcctccccgcggcattggtaaaacg
acattgaatcatctggccgaacatgctcggcgccacggtttgacacgactggaggcggcc
cgcgaatgcggcctgatcgaatcgatcaaagcccgcagccgcaccgccattaaaaagttt
gtcgagttgatcgaccgcctgatcagccaggccgccgaaccggtggaagcgatcctgggc
catgtgctgaccgagtccggctaccaggacgccctcaaaggctccccgctggaagaagac
caggaacggctggcgaacattgaagagttgttgacggccgcccgggagttcgacgcccag
cacgaaggcggactggaagcgtacctggaacaggcgtcgctcgtcgcggacaccgacgcc
tttgaaaccgaggtcgacaaggtcacgctgatgacgctgcatgcggccaaggggctggag
ttcgcccatgtgtatctgatcgccctcgaagaaggcctgctgccgcacgaacgcagccgc
gacagtccttccggcatggaggaagaacggcgcctgctgtttgtcggcatcacccgcgcg
caggagcggctgcagatcagctacgccatgaaccgcaacttccgcggcacgcaatggccg
accgtgcccagcagctttctcatggaactgcctcgcggcgagctgaaacggaccgagtcg
gcccgtccccgctacaacgagttcagccaggagccggaatacgccgaagaagcctgggtc
gaagaatcgatcgactacgcggaagagcacgtcgacgaatacgtccaggaggacccggaa
gaacaggctgaacgggaaaagaagccgtcccaggaccgcccgaaaatcaacctcaactcc
tttctcatgacgggcgccgacctgctggagcagcagaaaaagcgggccgagaacgccctt
cggttcaagccgggcatgctggtggagcacgccgagcatgggctgggggtgatcgttgcg
ctgagcgggggcgaccgcaatcgggtcgccacgatcgagttcgaagacgaagacaagcag
cgcaagttccggctgtcccacaccgatctgacgctggcgccgaagaagtaa
DBGET
integrated database retrieval system
