Lignipirellula cremea: Pla8534_47530
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Entry
Pla8534_47530 CDS
T06949
Symbol
pelA
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre00040
Pentose and glucuronate interconversions
lcre01100
Metabolic pathways
lcre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Pla8534_47530 (pelA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pla8534_47530 (pelA)
Enzymes [BR:
lcre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Pla8534_47530 (pelA)
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QDU96930
UniProt:
A0A518DYK6
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Position
complement(6378589..6379191)
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AA seq
200 aa
AA seq
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MRDILKLSTGLLLFLLPAAVSAGEPAATFESEPVGWASVEGATTGGKGGPVFRVSDEATL
AAKLKGNEPATIVITGPIALESKVRVGSNKTLLGEGAQGRLTGAGLTLAKVNNVILRNLT
IHDSDDDAINIEGESHHVWVDHCDLARSHDGLLDIKHGSDLITVSWCHFHDHHKTCLLGH
SDKPSALAEDRGPRIKESSG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacatcctcaaactttcgaccggccttctgctttttttactgccggccgcggtc
agcgccggagagccagcggcaactttcgaaagcgagccggtgggttgggccagcgttgaa
ggggcaacaaccggcggcaagggcggtcctgtattccgcgtcagcgatgaagcgacactt
gcggcaaagctgaaaggaaacgaaccggcgacgatcgtcattactgggccgattgccctg
gagtcgaaggtccgggttggttccaacaaaacccttctcggggagggagcccaagggcgg
ctaaccggggccggtttgaccctggccaaggtgaacaacgtcatccttcgcaatctgacg
attcacgattcggacgacgatgccatcaacattgagggcgagtcgcatcatgtctgggtt
gatcactgcgatctggcgcgttcccatgacggcttgctcgacatcaagcatggcagcgat
ttgatcaccgtttcctggtgtcattttcacgatcaccacaagacttgtctgctgggacac
agcgacaagccgagcgccctggccgaggatcgaggaccgaggataaaggaaagctccggg
tga
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