Lignipirellula cremea: Pla8534_50320
Help
Entry
Pla8534_50320 CDS
T06949
Name
(GenBank) Ankyrin repeats (3 copies)
Organism
lcre
Lignipirellula cremea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
Ank_2
Ank
Ank_4
Ank_3
AAA_16
Ank_5
ABC_tran
AAA_22
NACHT
Rad17
RsgA_GTPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QDU97187
UniProt:
A0A518DZB5
LinkDB
All DBs
Position
6746570..6750517
Genome browser
AA seq
1315 aa
AA seq
DB search
MSQLLDVPCVLISSSSDLQSERWRIKSYLNSGFLMRGANYRSLLWEEETEGGQLLSAKSP
VQLQIDELTSGRVHATVVMFAERIGFPLRGEPPTHAAAILEEWRSAGLHHPWPEDPAEAA
ELLDAGKFPLTGTVYELLVARSKEHPGELFIGYVADRDVAPRTTLDEIQFNQARVFQASA
VKGHAPHGKFVHEEYRPQVQGLLNLLKALGSQQHAGWIQRFETAEAMYKTLGQATLETLL
PRLPNRTGQLPFKGNMEHFAHDDPLPLPDRVGLRQKLKIDLVDYSRRGEMLVLEGPSGCG
KSSLMQKGVLGELPYEFKDAKVIVFRPTDFFSRTEGTPLEKMLGLLCEELESSPHGIHPP
LELRRPDARRALDRPAQAADSLGRLLETQKRNLFLGLDQFEELMDVIALEENQRDNARST
WQVLRFLGAALQHDRVYCIGTLEQMRRTLIAELKIRERIGLVIREEDADFPLGEVRGFLR
STTLDAGLSLSEDLVDDIFKMVEAFESDKAKQAQGGETASFLPLLGIWLYRFFVAFQDRM
LDAEAGASERFGMASKAITTQDLRERDIAMTLGPLIGEIVEAAWLEAGQLPQEQCEVTDR
EAMFKAINQGLQTPQLRPLITPFLGPGNSFRLTPFLKLMHKMGKAIPGVSWAPPKDQRDL
DNFLNALVALDRHGNMRLREIPRESPLSTMRALIDTFERRRLLVPTGRSNVRLVHQATVD
NWRPARVWLERQKESLEAERRIRHLSAEIAEFDTPLAELLAQHEKAFAYAVRVLFAKKAV
WSLHHDSSLQEQDEILRSFCIRILSQAEHGDHFVDCAGIQVSFVKIAAIYGINECIEKWL
SKDKTLVNHEEPETHDTPLMCAAWGAVETVRLLKRHGAKSKPNKEGWRPVAAAIQTGRID
ILQELYGEYLSPTDVIGPMGVTMLHEAARATSSAALIYLLQFSSSVDPRLETSKSTPLHF
AAMSGRTAQINLLMEDCERTAADSAGQTALDHAILYGQADAVSAILDHGALTDDERDTLL
AGLPCGDRPPMPAVVRAALHAQPAVLLRLLPYCDEEKLLRNADDEHALTVLMKHNHAYEG
GAPLADRVAYCVRHLLDEGQPQSRDVAAALKSVEGFPNAARMLQAWLVSCGEFDGVSDSA
LLGWLTGSQLLAAFSVLRNVPGVLDKTNKKGDRGATLLICKGKPEVIAAALAEEILPTLE
PELFRLEAAFRLVREGVPLPATREPLHPIISRIAADEAPELKALLKEMLPDSKSFRPLPH
RLALRDEEAAFAAVVGPLHDGVPLDQYDRPPSALAPPDRRPRYRELESTKLRSTP
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattattagacgtcccgtgcgtactcatttcatcgtcatcggacctgcagtcc
gaacgctggcggatcaagagttacctcaactctgggttcctaatgcgcggggccaactac
aggtccttgctctgggaggaagagactgagggcggccagttgctcagtgcaaagtccccg
gtccagctgcagatcgacgaattaacttccggccgcgtgcacgccaccgtggtgatgttc
gccgagcggatcggctttcccctgcggggagaaccacccacgcacgccgccgccatcctg
gaggaatggcgttcggcaggcctgcaccacccctggccggaagacccggcggaagcggcg
gaactgttagacgcaggcaagttccccttaacgggcaccgtctacgagttactcgtcgct
cgatccaaggaacatccgggcgaactgtttatcggctacgtcgccgaccgggatgtcgca
ccccggacgacccttgacgaaatccaattcaaccaggcacgggtcttccaggcgtccgcg
gtcaaaggccatgcgccgcatggaaagttcgtccatgaagagtatcgaccccaggtccag
ggtttacttaacctgctcaaagcgctcgggagccagcagcacgccggctggatacaacgt
tttgagacggccgaagccatgtacaagaccctgggtcaggcgacgctggagacgctgtta
ccgcgtttgcccaaccgcacgggccagctccccttcaagggaaatatggaacatttcgcc
cacgacgatccgctgcctttgcccgatcgcgttggcttgcgccagaagttaaagatcgat
ctcgtagactactcacgcaggggcgagatgcttgtccttgaggggccgagcggctgcggc
aaatcatctttgatgcaaaagggcgtcctcggggagttaccctacgagttcaaagacgcc
aaagttatcgttttccgccccaccgacttctttagtcggacagaaggaacgccgctggag
aagatgctggggttgctctgcgaggagctggaaagttcgccccacggcattcatcccccg
ctggaactgcggcgtcccgacgcccggcgcgctctcgatcgcccagcccaggccgccgac
tcgctagggcgattgctcgaaacccagaagcgtaatctcttcctcggccttgatcagttc
gaagagctgatggatgtcatcgcgttagaagaaaaccaacgcgacaacgcacgcagcacc
tggcaggtgctccgcttccttggcgccgctctccagcacgatcgtgtctactgcatcggc
acccttgagcaaatgcggaggactttgatcgccgagctgaagatccgcgagcgcatcggt
ctggtcatccgagaagaagacgcagacttccccctgggcgaggtccgtggcttcttgcgc
agcacaaccctggatgccggcctgagtctctcggaggatcttgtcgacgacattttcaag
atggtcgaggcatttgaaagcgacaaagcgaagcaagcccagggcggcgagacggcatcc
ttcttgccgcttctggggatctggctttaccggttttttgtagctttccaggaccggatg
ctggacgcagaagcgggagcttctgagcggtttgggatggcatccaaggcgatcacgacg
caggatcttcgggaacgcgatatcgcgatgacgcttggcccgctgatcggcgagatcgtt
gaagcggcctggctcgaggcgggccagttgccgcaggaacagtgcgaagtcaccgatcgc
gaggcaatgttcaaggcgatcaaccagggtttacaaaccccccaactccgtccgctgatt
acaccattccttggtccagggaactcttttcgtttaacgcccttcctcaagttgatgcac
aagatggggaaggcgatccccggtgtgagctgggcgccgccgaaagatcaaagggattta
gataattttctcaacgcccttgtcgccctggatcgtcacggcaacatgcgacttcgcgaa
atcccgcgagagtctcccctctctaccatgcgagcactgattgacactttcgagcggcgg
cgcctgctggtcccgacgggacgcagcaacgtccgactggtccaccaggcaacggtcgac
aactggcggccagccagggtctggctcgagcgacagaaggagtcgctggaggctgagcga
cgcatccgccacctgtccgcggaaatcgcggagttcgatacgccgctggcggaactgctc
gcccagcatgaaaaagcgtttgcatacgccgtgcgagtgttgtttgcaaagaaggcggta
tggtccctgcaccatgactcctccctgcaggagcaggatgaaatcctgcgaagtttctgc
atcaggatcctgtcccaggccgagcacggagaccatttcgtcgattgcgccggcatccag
gtctccttcgtgaaaatcgccgccatttacggtatcaacgagtgcatcgagaagtggcta
agcaaagacaaaaccctcgtcaatcatgaggagccagaaactcacgacactcccttgatg
tgtgcggcgtggggggctgtggagaccgtccgcctgctcaaaaggcacggggcaaaatca
aagccgaacaaggaaggctggcgccctgtcgctgcggcgatccagaccggccgcatcgac
atcctgcaggaactctatggcgagtacctcagcccgaccgacgtgatcggccccatgggt
gtcaccatgctgcacgaagcagcgcgggcgaccagttcggccgctctgatctacttgctg
cagttttcaagcagcgtcgacccacgcctggaaacgtccaagagcaccccgctgcacttc
gccgccatgtcgggccgaaccgcccagattaatctcctgatggaggactgcgaacgcact
gctgccgattccgcaggccagaccgcgctggaccacgcgatcctctacggccaggcggac
gccgtgagcgctatcctggaccacggagccctgaccgacgacgagcgggacacactgctg
gccggtttgccctgcggcgatcgtccgccgatgccggccgtcgtccgagccgccctgcac
gcccagccggcggttcttctccgactgctcccgtattgcgacgaggaaaagctgttgcgg
aacgccgacgacgaacatgccttgaccgtcctgatgaagcataaccacgcgtacgagggc
ggcgcgccactggccgaccgtgtggcctattgcgtgcgccacttgctcgacgagggtcaa
ccgcaaagccgcgatgtagccgctgcgctcaaatccgtggaaggcttcccgaacgccgcg
aggatgctgcaggcgtggcttgtcagctgcggcgagttcgacggcgtgtccgactcggcc
ctcctcggctggctcacgggttcgcaacttctcgccgcgttttcggtgctgcgtaacgtc
cccggcgtgctcgacaaaaccaataaaaagggcgaccgcggtgcgaccctgctgatctgc
aagggcaagcccgaagtcatcgccgccgcgctcgccgaagagatcttgccgacgcttgag
cccgagttgttccgcctggaggcggcgtttcgactggtaagagaaggcgtccctctccct
gccacgcgagaaccgctccacccgatcatcagccgaatcgcagccgatgaagcgcccgag
ctgaaagcgttgctcaaggagatgcttcccgacagcaagagcttccggccgctgccccac
cggttggctctgcgggacgaggaggcagcctttgcggcggtcgtcggaccgctgcatgac
ggcgtgccgctggaccagtacgatcgccccccttcggccctggcgccgccggaccgccgc
ccgcgttaccgcgaactggaatcgacaaaactcaggagcactccatga
DBGET
integrated database retrieval system
