Lignipirellula cremea: Pla8534_51690
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Entry
Pla8534_51690 CDS
T06949
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcre03016
]
Pla8534_51690 (truB)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pla8534_51690 (truB)
Transfer RNA biogenesis [BR:
lcre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pla8534_51690 (truB)
Prokaryotic type
Pla8534_51690 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDU97323
UniProt:
A0A518DZR2
LinkDB
All DBs
Position
complement(6924096..6924971)
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AA seq
291 aa
AA seq
DB search
MFGFLNINKPRGCTSRDVVDRVKFAARGWKVGHGGTLDPLADGVLVIALGQATRLVEYLQ
QAHKRYRAQFLLGRESATEDLEGEQILRPLAEPPTRADLDAALPAFIGSIQQRPPAYSAI
KVQGRRAYELARKGKEVQLDERPVEVYSIEVEHYDYPQLTLNIECGKGVYVRSLGRDLAE
ALGDCAVMSGLTRTAIGSFTLADAISPDEIPAPDVLPYLLTPAALAVAHLPTIVVTEMET
ELLFAGRFLDNRFQLEEPLAAAHNQEGELVALVEPRRREIKSVRNFKPGQQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggtttttgaatatcaacaagccgcgcgggtgtacctcgcgcgatgtggtggac
cgcgtcaagttcgccgcacggggctggaaagtggggcacggcggcacgcttgacccgctg
gccgacggcgtgctggtgattgccctggggcaggccacccgcctggtggagtacctgcag
caagcgcacaagcgataccgggcgcaatttctgctggggcgggaaagcgcgaccgaagac
ctggaaggtgagcagatcctccggccgctggccgagccgcccacccgggccgatctggac
gcagcgttgccggcgtttattggttcgatccagcagcgtccgccggcgtactccgccatc
aaagtgcaggggcgacgcgcttacgagctggcccgtaaagggaaagaagtgcagctggac
gaacgccctgtcgaggtctacagcatcgaggtcgagcactacgactatccgcagttgacg
ctcaacattgagtgcggcaaaggcgtttacgtccgttcgctgggccgcgatctggccgaa
gcgctgggcgactgcgcggtcatgtcgggcctgacacgcactgcgatcggctcgttcacc
ctggccgatgcgatctctcccgacgaaatcccggcgccggacgtgctgccgtatctgttg
acgccggccgcgctggcggtggcccatctgccgacgatcgtggtgacggagatggaaaca
gagctgctgttcgcgggacgctttctcgacaaccgcttccagctggaagagccgctggcg
gccgcccataaccaggaaggcgaactggtcgcgctggtcgagcctcgtcgccgcgagatc
aaatcggtccgcaacttcaagccaggccagcaatag
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