Lignipirellula cremea: Pla8534_57210
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Entry
Pla8534_57210 CDS
T06949
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcre
Lignipirellula cremea
Pathway
lcre03410
Base excision repair
lcre03430
Mismatch repair
lcre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pla8534_57210 (recJ)
03430 Mismatch repair
Pla8534_57210 (recJ)
03440 Homologous recombination
Pla8534_57210 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcre03400
]
Pla8534_57210 (recJ)
DNA repair and recombination proteins [BR:
lcre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Pla8534_57210 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pla8534_57210 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pla8534_57210 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
QDU97864
UniProt:
A0A518E1C4
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All DBs
Position
7635736..7637478
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AA seq
580 aa
AA seq
DB search
MPQRWRIHPHDQALVAAIEKSVGASPVVAQLLAARGVHNADDARIFLEAKLTGLRDPELL
PGVTEAAARIDQAVRAERRIVIYGDYDCDGMTAAAILVSCLREIGANVGSFTPNRLEDGY
GLNDRALEELAKRGASLVITVDCGIASVAEAATARRLGLELIITDHHQYGPELPDAAVLV
HPALPGSDYPFPGLCGAGVAFKLAWAICQQASQAKKVNDKLREFLLGAIALAAVGTVADV
VPLIDENRILVRHGLHSLSSRPNIGLTALMKVVELDKKPALTSDDIGFRLAPRLNAAGRF
GQAALGVELLTTRSAERAEALAEYIHDLNRQRDSLEQSILLQASKQIKEEFDAENDRAFV
LAGRDWHSGVIGIVAGRLAEKYHRPVVLLSLDKLGQKAASGSARAGGRLNLHDALEACST
YLVTHGGHAAAAGLSLEEANIDAFRAEFCEHVAGILTSADMGGELAIDAEAPLAQFNLPT
VDQIEQQLAPFGQGNRRPLFCTRGVELAETPRRMGGGDRHLQAKFRQHGQTMRAVAFGKG
DWADELAECNGPIDIAFHPVINDFRGRRVEMHLVDWRPSE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcagcggtggaggattcatccccacgatcaggcactcgtcgcggcaattgagaaa
agtgtcggcgcctcgcctgtggtcgcccagctgttggctgcgcggggagtacacaacgcc
gacgacgcccggattttcctggaagcaaagctcacgggcttgcgcgatccggaattactc
cctggcgtaacggaagcggctgcgcggattgatcaggcagtccgcgccgagcggcggatc
gtcatctatggcgattacgattgcgacggcatgacggcggcggccattctggtcagctgc
ctgcgagaaatcggcgccaacgtcggctcgtttacccccaatcgactcgaagacggctac
ggcctcaacgatcgagcgctggaagaactggccaaacggggcgcttccctggtgattacg
gtcgactgcggcattgccagcgtcgccgaagccgccaccgcccgacgactggggctggaa
ttgatcatcaccgatcaccaccagtacgggccggaactgcccgacgccgcggtgcttgtc
catcccgctttgcccggcagcgactaccctttccctggtttatgcggggcgggcgtcgcc
tttaaactggcctgggccatctgccagcaggccagccaggcaaagaaagtcaacgacaaa
ctgcgcgagtttctgctgggcgccatagccctggcggcggtcggcacggtcgctgatgtc
gtgcccctgattgatgagaatcgcatcctggtccggcatggcctgcacagcttgagttcc
cgccccaacatcggcctgaccgcgctgatgaaagtggtcgagctcgataaaaagccggcc
ctcaccagcgacgacatcggctttcgcctggcgccccggctcaacgcggccggccgtttt
ggccaagccgccctgggcgtggagttgctcaccacccgttccgccgaacgggccgaagcg
ctggccgagtacattcacgatctcaatcgccagcgcgacagcctggaacaaagcatcctg
ctccaggccagcaagcagatcaaagaagagttcgacgccgagaacgaccgggcctttgtg
ctggcgggccgcgactggcactcgggcgtgatcggcatcgtggccggccgtctggcggaa
aaatatcatcgccccgtggtgctgctgtcgctggacaagctgggccagaaggcagccagc
ggctccgcccgggccgggggacgcttgaatctgcatgacgccctggaagcatgcagcacg
tatctggtgacgcacggcggacacgcggccgcggccggcctgtcgctggaagaagcgaat
atcgacgcctttcgcgccgagttttgtgagcatgtcgccgggattctcaccagcgccgac
atgggcggagaactggcgatcgatgccgaagccccgctggcccagttcaacctgccaacc
gtcgatcagatcgaacagcaactggccccgttcgggcagggaaaccgtcggcctctcttc
tgcacccgcggcgtcgaactggcggaaacgccccgtcgcatgggcggcggcgatcgccac
ctgcaggccaaattccgccagcacgggcaaacgatgcgagcggtcgctttcggcaaaggg
gactgggccgacgaactggccgagtgcaacggcccaatcgatatcgctttccacccggtg
atcaacgatttccgcggacgtcgcgtggagatgcacctggtcgactggcgccccagcgag
taa
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