Lignipirellula cremea: Pla8534_57580
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Entry
Pla8534_57580 CDS
T06949
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lcre
Lignipirellula cremea
Pathway
lcre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pla8534_57580 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcre02000
]
Pla8534_57580 (appA)
Transporters [BR:
lcre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pla8534_57580 (appA)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
New_glue
Motif
Other DBs
NCBI-ProteinID:
QDU97900
UniProt:
A0A518E1D0
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All DBs
Position
complement(7685761..7687671)
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AA seq
636 aa
AA seq
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MFSRMTLVARTFAVLAAATMLITGIGCGGNSGSGTGSTTPTPGGSTASSSSGTDTPAGTE
TSTGAATSDTTAEAPPESKYKIHETDVLLLSYPDDPNTINLLTSNDSVSTAFQRFVYETF
ATQDMSDPKVWEPRLAESWEFDEENLEYTFHLRKGVLWHPITYPDGTVVKDVEFTAADVE
FSFDCLMNKFVEAAPLRSYYTDPDPETGEQIPRITMTVVDDYTVKVKWAKPYMMADEFTL
GSLPILPQHVYSLDEGRQLISLDFTSKEFGDAFNQHWANLTMCGTGPLIFGTWDKGEQVT
LRRNDQYWGDEFPFSEVVYQYITNEETLRQKGLQGKLDWTSFRQVDHYVAAKEHPNVKDG
KVKLVDYPTTGYRFMGYNQEREIFRDKKVRWAMSHATPVDQIIRDIYQGYAQRVTGPFAP
SSPFYDKSLQPVEFNIEKAKQLMREAGWEDTNANGVVDKEINGKRVEFEFDLMIFADSQT
YASIGQLIQSEFRKIGIKVQITPAKWALMLEKLNAKEFDATILGWAANWRSDPYQIWHGS
QADVEKSSNNIGYRNPKVDKLIEELQVTVNEKKQIELYQQIHQLIYEDQPYTFLYSDDGL
AAYDGRLEDVRTYEGLRPFIDMSEWRSSQPRLSTGE
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgcatgacgttagtcgcccggacgttcgccgtcctggccgccgcgacgatg
ctaatcacaggcatcggttgcggaggaaattccggctccggtaccggcagcacgactccc
actcccggcggaagcaccgcatcctccagcagcggaacggacactcccgctggcacagag
accagcactggcgccgcgacttctgacactacggccgaagcgcctcccgaatccaagtac
aagatccacgaaaccgacgtgctgctgttgtcgtatcccgacgaccccaacacgatcaac
ctgctcacttccaatgatagcgtcagcaccgcgttccagcgtttcgtctacgaaacgttc
gccacgcaggatatgtcggatcctaaagtctgggagccgcggctggcggaaagctgggag
tttgacgaggagaacctggagtacacttttcatctgcgcaagggcgtgctctggcatccg
attacctatcccgatggcacggtcgtcaaggatgtcgagttcaccgccgccgacgtagag
ttctcgttcgactgcctgatgaacaaattcgtcgaggcggccccgctgcgcagctactac
acggatcccgacccggaaacgggcgagcagattccgcgcatcaccatgacggtcgtcgac
gactacaccgtcaaggtgaagtgggccaagccgtacatgatggccgacgaattcaccctg
ggcagtctgcccattctgccccagcatgtttactcgctggatgagggacggcagctgatc
tcgctcgatttcacttccaaggaattcggcgacgcctttaaccagcactgggccaacctc
accatgtgcggcaccgggccgttgatctttggaacgtgggacaagggcgagcaggtcacg
ttgcgccgtaacgaccagtactggggcgacgagttccccttctccgaagtcgtttatcag
tacatcaccaatgaagaaacgctccgtcaaaaaggcctgcaggggaaactcgactggacc
agcttccgccaggtcgatcactatgtggcggctaaggagcatcccaacgtcaaggacggc
aaggtcaagctggtcgactacccaaccaccggttaccgtttcatggggtacaaccaggag
cgggaaatcttccgcgataaaaaagtccgctgggcgatgagccacgccacgccggtcgac
cagatcattcgcgacatttaccagggctacgcccagcgcgtcactggtcccttcgctcct
tccagcccgttttacgacaagagcctgcagccggtcgaattcaatattgaaaaagccaaa
cagctgatgcgcgaagccggctgggaagacaccaatgcaaacggcgttgtcgataaagag
atcaatggcaaacgggtggaatttgaattcgacctgatgatcttcgccgacagccagacg
tacgccagcatcggccagctgatccagtccgagttccgtaagatcggcatcaaggtgcaa
atcactcccgccaaatgggcgctgatgctggagaaactcaacgccaaggaattcgacgcc
accattctcggctgggccgcaaactggcgcagcgacccttaccagatctggcatggcagc
caggccgatgtagagaaaagttccaacaacatcggctatcgtaaccccaaggtggacaag
ctgattgaagagctgcaggtgacggtcaatgaaaagaaacagatcgaactttatcaacag
atccaccagctgatttacgaggatcaaccgtacaccttcctgtactcggacgacggcctg
gccgcctatgacggtcgcctggaagacgtccgcacttacgaaggcttgcggccgtttatc
gacatgtccgagtggcgcagcagccaacctcgacttagcacgggcgagtaa
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