Lignipirellula cremea: Pla8534_58080
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Entry
Pla8534_58080 CDS
T06949
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lcre
Lignipirellula cremea
Pathway
lcre02024
Quorum sensing
lcre03060
Protein export
lcre03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Pla8534_58080 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pla8534_58080 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pla8534_58080 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcre02044
]
Pla8534_58080 (ffh)
Enzymes [BR:
lcre01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Pla8534_58080 (ffh)
Secretion system [BR:
lcre02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Pla8534_58080 (ffh)
Eukaryotic Sec-SRP protein
Pla8534_58080 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_16
AAA_30
AAA_18
AAA_31
AAA_33
AAA_17
nSTAND3
AAA_5
APS_kinase
Zeta_toxin
AAA
MMR_HSR1
MobB
Thymidylate_kin
Rad17
Motif
Other DBs
NCBI-ProteinID:
QDU97949
UniProt:
A0A518E1I4
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All DBs
Position
7739737..7741203
Genome browser
AA seq
488 aa
AA seq
DB search
MFDSLQKNLQQAFKSISGRGTLTESNMRDGLRLIEESLLEADVSYEVVKKFMAEVSEKAL
GEKVLLKLNPGEQLVGIVHQQLIDTLGPVDPSIPLRNTPTVLMLCGLQGSGKTTTCGKLA
KLLLKQNIRPLLCAADLQRPAAIEQLHVLGKQLGVPVYSEPGATDPVKVCRNAKAKAEAE
GAKVVILDTAGRLAIDAELMEQLRQIDRRTNPDQIFLVVDGMTGQDAVLSAKAFNDALSI
DGVIMTKLDGDARGGALLSVKAVTEVPVKFIGVGEKLEDLEPFRPEGMASRILGMGDVVA
LVDTIRSEVDADAQKKAEEQWSKGQFTLDDLKKQMEMMAKPGLIKKLLGAMPGGGQLMEM
MGAGGSGEADIKRLIGVINSMTPAERKNPKLIDPSRRRRIAHGAGVPPQQVTDVVKQHDM
MKSMVTGLAGKGMGERMQMLNQVQEAATNPMGGMPKTKKGTGKRLSPAEKAKLKKQRDRE
MRKKKKGK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattcactccagaagaatctccagcaagcattcaagtcgatcagtgggcgggga
acgctcaccgagtcgaacatgcgcgacgggctgcgcctgatcgaagaatcgctgctcgaa
gccgacgtcagctacgaagtcgtgaagaaattcatggccgaagtcagcgaaaaggcgctc
ggcgagaaggttcttctcaagctgaacccgggcgagcagctggtcggcatcgtccatcaa
cagctgattgatacgctgggaccggttgatcccagcatcccgctgcggaacacgcccacc
gtcctgatgctttgcgggctccagggttccggcaaaaccaccacctgcggcaagctggcc
aaactgctgctgaagcagaatattcgccccctgctctgcgcggcggacctgcagcgtccg
gccgctattgagcagttgcacgtgctgggcaaacagctgggcgtgcccgtttactcggaa
ccgggcgcgaccgatccggtcaaagtctgccgcaacgccaaagccaaagcggaagcagaa
ggcgccaaggtcgtgatcctggatacggccggccgcctggcgatcgacgctgaattaatg
gaacagctgcggcaaatcgaccgccgcacgaaccccgaccagattttcctggtcgttgac
ggtatgacgggccaggacgcggtcctgagcgctaaagcgttcaacgacgccctcagtatc
gacggcgtgatcatgaccaagctcgacggcgacgcccgcggcggcgccctgctgtcggtc
aaggcagtcaccgaagtgccggtcaagttcatcggcgtcggcgaaaaactcgaggacctg
gagccgttccgtcccgaagggatggcaagtcggatcctcggcatgggcgacgtggtcgcc
ctggtcgacaccattcgcagcgaagtcgacgccgacgcacagaaaaaagccgaagagcag
tggtccaaaggtcagttcacgctcgacgacttgaaaaaacagatggaaatgatggccaag
ccaggcctcattaaaaagctgctaggcgccatgccaggcggcggacagctgatggaaatg
atgggagccggcggctccggcgaggccgatatcaagcggctcatcggcgtgatcaactcg
atgacgcccgccgaacgcaagaaccccaagctgattgacccctcccgtcgccgccgtatt
gctcatggcgccggcgtaccgccgcagcaagtgaccgatgtcgtcaaacagcacgacatg
atgaaatcgatggtcaccggactggccggcaagggaatgggggagcgaatgcaaatgctc
aaccaggtgcaggaagcggcgaccaacccgatgggcggcatgcccaaaacgaaaaagggc
accggcaaacgcctgagccccgccgaaaaggcgaagctcaaaaaacagcgtgatcgcgaa
atgcgaaaaaagaaaaagggaaaataa
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