Lignipirellula cremea: Pla8534_58190
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Entry
Pla8534_58190 CDS
T06949
Symbol
gspD_1
Name
(GenBank) Putative type II secretion system protein D precursor
KO
K02280
pilus assembly protein CpaC
Organism
lcre
Lignipirellula cremea
Pathway
lcre02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pla8534_58190 (gspD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcre02044
]
Pla8534_58190 (gspD_1)
02035 Bacterial motility proteins [BR:
lcre02035
]
Pla8534_58190 (gspD_1)
Secretion system [BR:
lcre02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Pla8534_58190 (gspD_1)
Bacterial motility proteins [BR:
lcre02035
]
Pilus system
Pilus assembly proteins
Pla8534_58190 (gspD_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
QDU97960
UniProt:
A0A518E1J7
LinkDB
All DBs
Position
complement(7757317..7759098)
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AA seq
593 aa
AA seq
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MMITRYFRTATPRGVAALALLVLVAHSPVYAGPPAYPASVMNVAQGGGPGAKQNLEAGSG
ESLYFHVENDAQRLEMIVNTSRILTFDFNVPRLLVNNTQILKATPLAPNRVQIQASAPGV
TQLNIWDENDQVRSIDVIIYGDARELQYILDTEFPDADIRVRPSNGSARGSVIISGFVSR
PDHVTRIVQIAEDFYPNVINNMSVGGLQQVVLHVKVVEVSRTKLRQFGIDWALLTGNDFV
IQSAAGLIAAAATSGGTLTAAGPNTLSVGVLNGTNTVGFLVDVLRQNNMAKLLAEPTLVT
VSGRPASFNSGGEVPIPVNGGLGVTSVEYREFGTQIDFVPIVLGNGNIRLEVRPQITEID
ESLRDATTGSPGFRSRRVDTGVEMRAGQTLALAGLIQNRVSSTDRGLPWLADLPWVGPMF
GRVQETVNEVELLILVTPEFVTPLEANEVPPCGPGEATVPPNDTEFYFRRYREVPNCNCQ
DGSCQPGGPMGQAPLTEYPSGQPAGNQPPMQYPAPQQAPQQYHEVLPAPAPMAVGSNGRN
GYPPVAVSNAPTANTMGNRQPSYNRSNARPDIRNAGLSGEPSLIGPIGYDVIK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgataacgcgctactttcgtaccgcgacgccaaggggcgtcgcggctctcgccttg
ctggtcctggttgcgcactcgccagtgtacgcaggaccgccagcttaccccgcttcggtg
atgaacgtcgcccagggcggcgggccaggcgccaaacagaatctggaagccggctccggg
gagtcgctctacttccatgtcgagaacgacgcgcaacgtctcgaaatgatcgtcaacacc
agccgcatcctcacgtttgatttcaacgtgccccgcctgctggtcaacaacacccagatc
ctcaaggcgactcctctggctcccaaccgggtgcagatccaggcttcggccccgggcgtg
acccagctgaacatctgggacgagaacgatcaggtccgctcgatcgacgtcatcatctat
ggcgacgctcgcgagctgcagtacattctcgacacggagtttcccgacgccgacattcgc
gtccggcctagcaacggcagcgcccgcggcagcgtgatcatttccggctttgtgtcgcga
cctgaccatgtcacgcggattgtgcagatcgccgaggacttctatcccaacgtgatcaac
aacatgagcgttggcggcctgcagcaggtcgtgctgcatgtgaaagtggtcgaagtctcc
cgcaccaaactgcggcaattcggcatcgactgggctctgctgaccggcaacgactttgtt
atccagagtgctgcggggctgatcgctgcggcggctacctcgggcggaacactcacggcc
gcgggacccaacacgctgtccgtcggcgtgctcaacggcaccaacacggtcggctttctg
gtcgacgtgctgcgacaaaacaatatggccaagctgcttgctgaaccaacgctggtcacc
gtcagcggacggcccgccagctttaactccggcggtgaagtgccgattcccgtcaacggc
ggtctgggcgtgacctcggttgagtaccgcgagttcggtacgcagatcgactttgtgccg
atcgtgctgggcaacggcaatatccgtttggaagttcgcccgcagatcacggaaatcgac
gaatccttgcgggacgccacgaccggttcgcccggttttcgtagccgccgggtcgatacg
ggcgtggagatgcgagccggacaaaccctggccctggccggtttgatccagaaccgcgtt
tcttcgaccgaccgcggtctaccctggctggcggatctgccctgggtcggcccgatgttt
ggccgcgtgcaggaaacggtcaacgaagtcgaattgctgatcctggtgacgcccgagttt
gttacgcctttggaagcgaacgaagtgcctccctgcggaccgggcgaagcgaccgtaccc
ccgaacgacacggagttctacttccgtcgttaccgcgaagttcccaactgtaactgccag
gacggctcctgccagcccggcggcccgatgggccaggctcccctgaccgaatatcccagc
ggccagccggccggcaaccagccgccgatgcagtatccggctccgcagcaggccccccag
cagtaccacgaggtgcttccggcgcccgcaccgatggcggtcggttccaacggtcgcaac
ggttatccgccggtcgccgtttccaacgcaccgacggcaaacacgatgggcaaccggcag
ccttcctacaatcggtcaaatgccagacccgatattcggaatgcaggactctccggcgaa
ccttcgctcattggtccgatcggttatgacgttattaagtaa
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