Lignipirellula cremea: Pla8534_62030
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Entry
Pla8534_62030 CDS
T06949
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lcre
Lignipirellula cremea
Brite
KEGG Orthology (KO) [BR:
lcre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcre03016
]
Pla8534_62030 (truD)
Enzymes [BR:
lcre01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Pla8534_62030 (truD)
Transfer RNA biogenesis [BR:
lcre03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pla8534_62030 (truD)
Prokaryotic type
Pla8534_62030 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QDU98336
UniProt:
A0A518E2L7
LinkDB
All DBs
Position
8293918..8294964
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AA seq
348 aa
AA seq
DB search
MNALSPSLPLSGLRQDRPPIGGQWKLSPEDFVVEEIPAYEPCGEGEHLFLWIEKRDCSGE
FLTRRISKALGVPPREIGMAGIKDRTAVTRQYISTPARYEDRVEEINNELIQVLAVKRHR
NKLKTGHLRGNQFTLWVRGVDEQAMETAQALAPLIEQWGFPNYFGDQRFGNDQETLKLGL
DLLRGVRTPRSIPPAKRRFLLRLALSAAQSHLFNLYLSERIAEQLLHTVLAGDVMEVVES
GGLFIASDLEAEQARCTAGEIVVSGPLFGPKMKQAEAPSVEREDRLLRQNELTIEQFSLF
KNLTAGARRPAVVRPTQLTVEQVGPDLRFEFALPKGVYATTLLREFVE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccctttccccttcacttcctctctctggcctgcggcaggaccgtccgcctatt
ggcggccaatggaagctgtcgcctgaggactttgtggtggaggagatcccggcgtacgaa
ccgtgcggcgaaggggagcatttgttcctgtggatcgaaaaacgggactgctccggcgag
tttctcacccgtcgcatttccaaggcgctaggagtgccgccccgcgagatcggcatggcg
ggtatcaaagatcgcaccgccgtcacgcgccagtacatttcgacgcccgcccggtacgaa
gaccgcgtggaagagatcaataacgagctgatccaggtgctggctgtcaaacggcaccgg
aacaagctcaagacaggccacctccgcggcaaccagttcaccctctgggtccgcggcgtc
gacgagcaggccatggagaccgcccaggcgctggccccgctgatcgagcagtggggcttt
cccaactattttggcgaccagcgttttggcaatgaccaggaaacgctgaagctggggttg
gacctgttgcggggcgtcagaacgccgcggtcgatcccgccggccaaacgccggttcctg
ctgcggctggcgctgtcggccgcccagtcgcatctgttcaacttgtacctgagcgagcgc
attgccgagcagctgctgcacacggtgctggccggcgacgtgatggaagtcgtcgaaagc
ggcggcctgtttatcgcctcggatctggaagcggaacaggctcgctgcaccgcgggcgag
atcgtcgtgagcggaccgctgttcggccccaaaatgaaacaggccgaagcgccgtcggtc
gagcgggaagatcgcctgctccggcagaatgaactcacgatcgagcagttcagcctgttc
aaaaatctgaccgccggcgccagacgtccggccgtcgtgcggcccacgcaactcaccgtg
gagcaggtcggccccgacctgcggtttgagttcgccctgcccaagggcgtctacgccacc
actctgctgcgtgagttcgtcgagtag
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