Lacticaseibacillus paracasei BD-II: LCBD_0006
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Entry
LCBD_0006 CDS
T01955
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcs03032
]
LCBD_0006
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_0006
Enzymes [BR:
lcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LCBD_0006
DNA replication proteins [BR:
lcs03032
]
Prokaryotic type
DNA Topoisomerases
LCBD_0006
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCBD_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
AEA55507
UniProt:
A0A806DZQ7
LinkDB
All DBs
Position
7069..9690
Genome browser
AA seq
873 aa
AA seq
DB search
MDDRQESRITNVNLGETMRKSFLEYAMSVIVARALPDVRDGLKPVQRRILYGMNELGVTP
DKPYKKSARIVGDVMGKYHPHGDSSIYEGLVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTEARMSKIAVEMLRDINKDTIDFQDNYDGTEKEPVVLPARFPNLLVNGATGIAVGMT
TNIPPHNLSETISALHVLMDNPDATTADLMQALPGPDFPTGGVVMGKSGIRHAYETGRGT
IVLRGKVDVQTEKSGRERIVITEIPYMVNKAKMVERIADLVHEKKIDGIVTLRDESDRDG
MRIVIDVRRDASASVILNNLYKLTPLQTGFSFNMVAIVNGAPKVLSLKQILQYYLDHQEN
VIRRRTQFDLRKAKAREHILEGLRIALDHIDEIITIIRSSETGDKAKVILMDKFKLSDKQ
SQAILDMRLVRLTGLEREKVESEYKDVEAAIADYTDILARPERVHQIIYNELLDIQKKFG
DKRRTELLVGEVLSLEDEDLIEQEDVVITLSHNGYVKRLATSEFKAQNRGGRGIQGMNVH
DDDFVERLISTSTHDVLLFFTNKGKVYRSKGYEIPEYGRTAKGIPIINLLGVGAGEKIQT
VINVHEGENDDRYLFFVTQKGVVKRTPVKEFANIRSNGLIALNLKDEDELNNVILTSGQD
NILIGTHLGYSVTFKEQDVRSMGRSATGVRGIRLREHDYVVGSDILKPDSEVFVISEKGY
GKRTAAKEYPIKGRGGKGIKTANITAKNGPLAGVTTVDGTEDILVMTDSGVMIRFNIQSV
SQTGRATLGVRLIRVDDDAKVATMAKVEPESDDPDDGSKPDQPTSPTDGSAAPTSQQPAD
GSYAGDADQQVSQLLDRAEADQPEQHDTGDQPE
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgccaagaaagccgaattaccaatgtgaacctcggcgaaacaatgcgtaaa
tcattccttgaatacgcgatgagtgtcattgtggcgcgggccttgcctgatgtgcgcgat
ggcctcaagccggttcaacggcggattctgtacggtatgaatgaactcggcgtgacgccg
gataaaccgtacaagaagagtgcgcgtattgttggggatgtcatggggaaataccatccg
catggtgatagctcgatttatgaagggctcgtacgaatggcacaggacttcagctatcgt
tacatgctggtcgatggccacgggaactttgggtctgtcgatggtgacggtgccgctgcg
atgcggtataccgaagctcgcatgagcaaaatagcagtcgagatgctgcgtgacatcaac
aaagatacgattgattttcaggataactatgatggcacggaaaaagaaccggttgtttta
ccggcacgttttccaaatttgttggtcaatggggcgactgggattgcggtcggtatgacg
accaatattccgccgcataatctgtcagagactatctcggcgctgcacgtgttgatggat
aatccagatgccacgacagctgacctaatgcaggcactgccaggacctgattttccaacc
ggcggcgttgtgatgggtaagtcaggcattcgccatgcttatgaaactggccgcggcacg
attgttttgcgcgggaaagttgatgttcagacggagaagtctggccgtgaacggatcgtg
attaccgagattccatatatggttaacaaagccaaaatggttgaacggatcgcagatttg
gttcatgaaaagaaaatcgatgggatcgtaaccttgcgggatgaatctgaccgtgacggg
atgcggatcgtcattgatgtgcgccgtgatgctagtgcatcagttattttgaataacttg
tacaagctcacgccactacaaaccggcttttcattcaacatggtggcaatcgttaatggt
gcgccaaaagtgttgagcttgaaacagatcctgcaatattatctggatcatcaagaaaac
gtcattcgtcggcggacgcaatttgacctgcgtaaggccaaggctcgtgagcatatcctc
gaaggattacggattgcgcttgatcatattgatgaaatcatcacgattatccgtagttct
gaaactggcgacaaggcaaaagtcatcttgatggacaagtttaagttgtctgacaagcag
agccaagcaatcttggatatgcggctggttcggttgaccggtttggaacgcgagaaggtt
gaaagcgaatataaggatgttgaagcagcgattgctgattatactgatattcttgctaga
ccagaacgtgttcatcagatcatctacaacgaattgctggatattcagaagaagttcggc
gataagcgccgtactgaattactggtcggtgaagtgctcagtcttgaagatgaagatctg
atcgagcaagaagacgtggtcatcacgttgagtcataacggctacgtcaagcgattggca
accagtgaattcaaggcacaaaatcgcgggggtcgcggtattcaggggatgaacgtccat
gatgacgatttcgttgaacgcctgatttcgacttccacgcatgatgtcctgctcttcttc
accaacaaaggtaaagtttatcgcagcaagggttacgaaattcctgagtacggtcgaacc
gcaaaagggattccaattatcaacttgcttggtgtcggtgccggtgaaaagattcaaacg
gttatcaacgtgcatgaaggcgaaaatgatgatcgttatctcttcttcgtcacgcaaaaa
ggcgttgttaagcgcacaccggtgaaggaattcgccaatattcgcagcaacggactgatt
gcgttgaatctcaaggatgaagacgaactgaataatgtcatcctaacgtccggacaagac
aatatcctgatcgggacgcatctgggttacagtgtgaccttcaaggaacaagacgttcgc
tcaatgggacgttcagcgactggggttcgaggtattcgtttacgtgaacacgattacgta
gtgggttccgacattctcaaacccgattccgaagtctttgtcatttcagaaaaaggttac
ggtaaacggacggcagcgaaggaatatccgattaaaggtcgtggcggtaaagggatcaag
acagccaacatcaccgccaagaatggtccgttggcaggggtcactaccgttgatggtacc
gaagatattcttgttatgactgattctggtgtcatgattcgcttcaatattcaaagtgtt
tcgcaaactggccgagcaacgttaggagttcgtttaattcgagttgacgacgatgccaag
gttgcaacgatggccaaggttgaaccggaaagcgacgatccagacgatggcagcaagcca
gatcagccaactagcccgacagacggttctgctgcaccaacctcgcagcagccagctgat
ggttcgtatgctggcgatgccgatcagcaagtgagccaattgcttgatcgcgctgaagct
gatcaaccagagcaacatgatactggcgaccagcctgaataa
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