Lacticaseibacillus paracasei BD-II: LCBD_0479
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Entry
LCBD_0479 CDS
T01955
Name
(GenBank) ABC-type multidrug transport system, ATPase and permease components
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCBD_0479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcs02000
]
LCBD_0479
Transporters [BR:
lcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LCBD_0479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_19
DUF87
AAA_30
SMC_N
AAA_16
DO-GTPase2
AAA_29
AAA_22
SRP54
NB-ARC
Zeta_toxin
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEA55978
UniProt:
A0A806E0D3
LinkDB
All DBs
Position
complement(473388..475097)
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AA seq
569 aa
AA seq
DB search
MLKILFDHMHGCARVSFFLAPLAIMGEALLDLQQPTLMASIVDVGLAKKDMTYVWHTAIL
MAVIAIAAFALGAICNAFSSYAALKMGQNLRTHLLAISLADRDPQALKPETLITRITNDV
TQMQTLVSMLTRGLVRSPMLLFGGIVMSIIVSPRLSWIILIALPILAIYIYVIVRRSLPL
YTAMQGQVDVMNRIMSENLTGAKTIKAYVLEDHQLTQFNTENRNLQTISQRAVLATVTLA
PLIMLVLNLAVVAALAYGGNLAISRTITTGEIMAFVNYMIQITTAMTNTVNLITTFSRAI
TSSARVNAVLAEEAGTEASGTLPAPAGSTIQFEHVNFGFSQSRPILDDINLTVPSGQWLG
IIGSTGSGKTTLIALLTRLYEHYQGNITVGGTDIQQITLPALHKKITVALQDSLLFSGTV
AHNLSYGAPQATPTQLASGVAIARATEFVGTNYDAPVEEAGKNFSGGQRQRLNLARAIIP
DPDILVMDDATSAVDQETNTEIQDALVKARRNRTTIIISQRVPNIMDCDQIIVMQNGQIT
ARGTHTELVKSSPFYAQLVQTQLGGDYID
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaattttgttcgaccatatgcacggctgcgcacgggtaagtttttttctcgcg
ccgttagcgatcatgggcgaagcattgcttgacctgcaacaaccgaccttgatggctagc
atcgtggacgtgggattggctaagaaagatatgacttatgtttggcataccgctattctc
atggcagtgattgctattgctgcgttcgctttaggtgctatctgtaacgccttctcctcc
tatgcagccttgaaaatgggccaaaacctgcggactcatctgctggctatttcactggcc
gatcgcgatccccaagcactcaaacccgaaacactcatcacccgcatcacaaacgatgtt
acgcaaatgcagacgctggtaagcatgctgacgcgcggactcgttcgctcgcctatgctg
ctgttcggcggcattgtcatgtcgattatcgtatcaccacggctgtcatggatcattttg
attgccttacccattcttgccatctatatctacgtcatcgttcgacgttcgctgccactt
tacacggctatgcaaggacaagttgacgtcatgaaccggattatgagtgaaaacttgact
ggcgccaaaacgatcaaggcgtacgtactggaagaccaccaactgactcaattcaacact
gaaaatcgcaacctgcagacgattagtcaacgcgccgttttggcaacggtcactttggcg
ccactgatcatgctggtacttaatctggcagtcgttgctgcactggcttatggcggcaat
ctagccatcagccgcaccatcaccactggcgaaatcatggcgttcgtcaattacatgatt
caaattacgacggcgatgaccaataccgttaacctcatcacgaccttttcacgggcaatt
acttctagtgcacgcgtcaacgccgttttggccgaagaagcaggtactgaggccagtggg
acattacctgccccagctggtagcaccatccagtttgagcacgtgaactttggtttttcg
caaagtcgaccgatccttgatgacatcaatctcaccgttccaagcggtcagtggctgggc
attatcggctccactggttctggcaaaaccacgctgatcgccttattaacccgactttat
gagcattatcaaggcaatatcacggtcggtggcaccgatatccaacaaatcaccttaccg
gctttacacaaaaaaatcacggtcgccttacaggactcactgcttttttctggcactgtc
gcgcataatctgagttatggcgcgccgcaagccacgccgacacaattagccagcggcgtt
gctatcgctagggcaactgagtttgtcgggactaattatgatgcccccgtcgaagaagct
gggaaaaacttttctggcggtcaacggcaacgtctgaatcttgcccgcgccatcatcccc
gatcctgatattctggtcatggatgacgctaccagtgctgtggatcaggaaaccaacact
gagattcaagatgccttggttaaggctcgccgcaaccgtacaaccatcatcatttcgcaa
cgcgtcccgaacatcatggactgtgatcaaatcatcgtcatgcaaaacgggcaaattacg
gctcgcggaacgcataccgagttggtcaaaagttcgccattttacgcgcaactggttcaa
acccaactgggaggtgactacattgattaa
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