Lacticaseibacillus paracasei BD-II: LCBD_0701
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Entry
LCBD_0701 CDS
T01955
Name
(GenBank) ABC transporter, ATPase component
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCBD_0701
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcs02000
]
LCBD_0701
01504 Antimicrobial resistance genes [BR:
lcs01504
]
LCBD_0701
Transporters [BR:
lcs02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LCBD_0701
Antimicrobial resistance genes [BR:
lcs01504
]
Gene variants
Macrolide resistance genes
Transporters
LCBD_0701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
Dynamin_N
AAA_23
AAA_16
AAA_15
NACHT
AAA_28
MMR_HSR1
FtsK_SpoIIIE
TsaE
AAA_18
nSTAND6
AAA_33
ABC_tran_Xtn
AAA_30
ORC-CDC6-like
nSTAND3
NB-ARC
MobB
ATP-synt_ab
RNA_helicase
RsgA_GTPase
Zeta_toxin
Roc
Pox_A32
AAA_7
DO-GTPase2
DUF87
YobI-ATPase
MeaB
DUF815
SRPRB
PRK
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AEA56199
UniProt:
K0N8T0
LinkDB
All DBs
Position
complement(680790..682271)
Genome browser
AA seq
493 aa
AA seq
DB search
MSTIQIKQLNFAYDGQAPLFTNRTFDLDTNWHLGLVGRNGRGKTTLLRILQQALPYSGTV
TVPLQLQYFPQTLDETQLTLTAAQAITDVAQWQLERELNLLHADPNILWRPFVDLSGGEQ
TKVRLALLFIQDNGFALIDEPTNHLDLRSRRQVTAYLQQKPGFIVVSHDRDFLDSITDLT
LAIQRQQITLYQGNFSTFMTEKERQDQTELAKNGQLKTEITRLKRTAHDKKVWAENKEKS
IYGNPHIKDSGHNAGRGFISARAARTMKKSKNLEHRMTKEIDEKESLLKNLEKVDPLTML
PVSTHHHQLVVAEKVQVGFDQPLFQPISFTLTRGDRIAIVGDNGSGKSTLIRALLKQFTG
MQSGHLTLAPVSLSLVRQQYTDNRGTLVDFAKQHQLSRETLLNNLRKLGMPRADFNTPIE
HLSMGQQKKVELARSLATPGALYIWDEPLNYLDTYNQDQLVAAIKHYQPTMLFVEHDEHF
IEQVATKIIRLQP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgattcaaattaaacagctcaattttgcttatgatggtcaagcaccgcttttt
acgaacagaacctttgaccttgataccaactggcatctcggattggtcggtcgcaacggc
cgaggcaaaaccactttgttgcgaattttacaacaagcactaccctacagtggcacggtg
actgttcccttgcagttgcaatattttcctcaaacgctggatgaaacccaactgacgctg
actgccgcacaagccatcaccgatgttgcgcaatggcaactcgaacgtgaactaaatctg
ctccacgctgatcctaacattctctggcgcccatttgtcgatttatctggtggtgagcaa
acaaaagtgcgtctcgccttactgttcattcaagacaatggtttcgcactcattgacgag
ccaaccaatcacctcgacctgcgcagccgccgacaagtcaccgcctatctccaacaaaaa
cccggctttattgtcgttagccatgatcgtgattttttggacagcatcaccgaccttacg
ctagcaatccagcggcagcaaatcaccctttatcaaggcaatttctccaccttcatgacc
gaaaaagagcggcaagatcaaactgaactggccaaaaatggtcaacttaaaactgaaatt
acccgacttaaacgaacggcccatgataaaaaagtttgggcggaaaataaagaaaagagt
atctatggtaatccgcacatcaaggacagcggtcataatgctggtcgcgggtttattagc
gctcgagctgcacggacgatgaaaaaaagtaaaaatctcgaacaccggatgactaaagaa
atcgatgagaaggaaagtcttctgaagaacctagaaaaggttgatccactcaccatgctg
ccggtgtcaacccatcaccatcaacttgtggtcgctgaaaaggtccaagtcggattcgat
caaccgcttttccagccgatctcttttactttgacccgcggcgatcggattgccattgtt
ggtgacaatggcagcggcaagtcgaccttgattcgcgccttgctgaagcagttcaccggc
atgcagtcagggcatctcaccttggcacccgtcagtcttagccttgttcgccaacaatac
accgataaccgcggtacattagtcgactttgccaaacagcatcagcttagccgtgaaacc
ttgcttaacaacttgcgcaaacttggcatgccgcgagccgactttaacacgccgattgag
catctgagcatgggccaacagaaaaaagtcgaactagcgcgatccctagccaccccggga
gctttgtacatttgggacgagccgctcaattatttggacacttacaaccaagaccagctg
gtcgccgccatcaagcattatcaaccgacgatgctttttgtcgagcacgatgagcatttt
atcgagcaagttgcgacaaaaatcattcgcctgcaaccatga
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