Lacticaseibacillus paracasei BD-II: LCBD_0754
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Entry
LCBD_0754 CDS
T01955
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_0754
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCBD_0754
Archaeal homologous recombinant proteins
LCBD_0754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_27
AAA_29
nSTAND3
NID
Motif
Other DBs
NCBI-ProteinID:
AEA56252
UniProt:
K0MTC3
LinkDB
All DBs
Position
739028..742153
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERD
GGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSD
EKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVAS
QAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQL
KQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAK
SDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKT
QQQTSLDNLGLDELITTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAE
TQVAVTTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAAL
KQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKT
GILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARI
DAAEAQSALKTMQKNLPAEATDLASVAAQVTTLQTTITTYQDQLQEAQARVNALDRQLAG
LQADEKHAAAQVTALTKEQAEAKATFTIAVTQYFGADGKQRFAELQLRVSQLPLLNEQVQ
TYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAE
KLVKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRL
QVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVEPAGTGRSHLKIVHSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaacaattacacatgcaattttttggtccgtatgcagatgcagtcgttgat
tttgacgattttcgcaccagtcccttattcttgatcagcgggccgaccggcagtggtaaa
accacgatttttgatgctttgatttatgccttgtatggtgaaacgtcaggtgagcgtgac
ggtgggcaaatgcgctcaaattttgcaggtaacagcgatttaacaaaggtgacactcacc
tttgatcatgatggcaaacattatttaatcgagcgccaaccgccgcaattgcaaagtaaa
aaacgcggcgatggactaaccgaagtcaaagctaaggtgttgctagctatctcctcagat
gaaaaacaggtggctgagtaccgtaagaaaaatcaagttcaggaacagctagacgccgtt
ttacaccttgatgcttcgcagtttcgacagattgttttgttgccacaaggcgattttcgc
cggttcttagatgctgatagcaatgcgaaagaagatctactgcgtgacttgttcggtact
cagttgattcaacgttggcaaaccgctatgttggcgcagatgaaggccaagggagcagcc
attcaggaccaagagcggatgttagacgttttgatgtcgcagtttgacttcgagacggct
cctgacgagcatgctacgatggcggataagctgtcattgatgagagcaacggtggcgagt
caagcgaaagttgtgacagcaagacaagcgaccgcggcgcaaagtcaccaacgatatcag
gaagcacaaacggcactgcaacaggggcaacaattggcgcaggcttttacagagcgagaa
caagccgccacagctttagcaaaactggcggagcaaaaacaaacccatcagaagcaatta
aaacaaattgaacaattgacatgggtacagcaacatgaaaatgctgcccaacgcgttcaa
aaggctggacaagatcttaaagcggcaattgtgcagtctgaacaaacgcaagcagcttta
acgacgaccgaacagaaattttctctggacaagcaagctttagcacgcttgcaggccaaa
tcagaccagattgaggcccaaaagaaacaactgaatagtttacaggctgttcagcaacag
ttgacagccatcgccgaacaaaataaacaggtgattaaacaagcagcgattgttaatgag
gctgagcttgcgttgacgcacgcacaacagcagttgacagacgcccaaactgttaaaaca
cagcagcaaacaagtctggataacttgggcttggatgagctgataaccacggtcaatact
cagcgcaacttattggctgccttagtgccacaggctgctaattatcaggaagcccaagct
gatgttgcgcagttgtctatggccatcaaaaaaacccaagttacgctggagcaagccgaa
acgcaggtagcagtcacaacctcgcatttgaacaagcttcagcagactcagattcgccaa
caaattgcacatttggctgctaagctcgagcctgacagcccatgtcctgtttgcggcagt
actagccatccgcatccggcgcttgtggttgacgaaccattggtgagcgaagcagcgttg
aaacaagccgatcaggaacggcaaaaggctgccgcaagaaaaactatggtcgagacacaa
ttggcgaatcttgaaacccaactgaaaactgcgaaggccaaaaccgcacaggcaaggcag
gcttttactgagcattggcaagaacaggccaaactgattgcaggcgttgcggataaaact
ggtattttacaacaattaacggcgttgaaaacactggcggcaactaacgagcaccagtta
acggaagcgcaaacggagcacgctgctttgcaagttgcgctaaaaaagagtgacaaggcc
atcactaccggtacgacaaaagttcagcaatgcgaagctagtttgaatacggctagaatt
gatgcggctgaagcgcaaagtgcgttgaagaccatgcaaaagaacctgcccgcggaagcg
actgatttggcgtcggtcgctgctcaagttacaaccctgcagacaaccattacaacgtat
caggatcaacttcaggaggcgcaggcaagggtcaatgctttggaccggcaattagccggg
ttgcaagcagacgagaaacacgccgcggcacaagtgactgctttgaccaaggaacaggcg
gaagcaaaagcaacctttacgatagcagtcacgcagtattttggtgctgatggcaagcaa
cggttcgccgagttgcagctgcgggtatcacaattaccgctattgaacgaacaggttcag
acttatgagcatacacagctcaagcaacaaacgttattagatgccgccaataaaactatt
ggtacccaagcacagccacagcttgatcagctcgaggccgaagcaacagcagcggaaacg
acagcaacaaacgaccaaacggctttgattaagattagtcaggcgcatgatgctgctgaa
aaattggtcaaacaagccgccactatctttacggccaatcaaacggcgcttgcagcctat
gcggatttacaaacactggccactgtgatgaatggcaatggtcccaagaaactcagtctg
gagcgatacgttttgcaggcttatttgcaagaaattctgaatgtggccaatagccgtctg
caggttttgtccaataaccggtatcaatttgttttgcatactagtttgggaacgcagaaa
attcattctggcttggagattgatgtttacgatgatcaggtaggagaaaagcgtgccgtg
cagacgctatcgggcggcgaaagcttcatcgctgcgctcagtctggcattggcgttaggc
gaagtgattcagcaggaaagcggcggcattaacattgatgcgttgtttgttgatgaaggc
ttcggcagccttgatgccaatagtcttgatgtggcgatgaatgcgttggagtcgctagaa
ggtgaatcgcggctgattggcatcatctcccatgtgaccgagttgcgggataatattcct
gaccagttgcaagttgagccagcaggtacgggccgcagccacttgaagatcgtccactcg
gcttag
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integrated database retrieval system
