Lacticaseibacillus paracasei BD-II: LCBD_0866
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Entry
LCBD_0866 CDS
T01955
Symbol
mutSB
Name
(GenBank) DNA mismatch repair protein, MutSB
KO
K07456
DNA mismatch repair protein MutS2
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCBD_0866 (mutSB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_0866 (mutSB)
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LCBD_0866 (mutSB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Spectrin_SESTD1
MutS_III
ATG17_like
AAA_21
DUF3053
AAA_22
LprI
AAA_14
PRKCSH-like
PIN_8
Motif
Other DBs
NCBI-ProteinID:
AEA56364
UniProt:
A0A806EY05
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All DBs
Position
839908..842268
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AA seq
786 aa
AA seq
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MNEKILKTLEYDKIQQALLGQVVTANGRQLVQAMQPLTDPVAVQQALDETADGASALRLK
GGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAIDKFLTDLQDQIDFRQLYT
LQESLTVLPQLSRRLKTAVDPDGTLTDEASPQLHGVREQIKSIEGKIRGKMTNYTRGAQS
KYLSDPIVTIRDDRYVIPVKAEYRAKFGGVVHDQSATGQTLFIEPQVIVALNNRLREAQL
AEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPLVSADNDV
LLRDARHPLIDPHKVVGNDIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIP
ADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTD
PQEGAALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLL
VGVPGRSNAFDISARLGLPSVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARR
QLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANSLVDKAQTKADKIIKQLRQMQLTNP
GTVKENQLIAAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASYDQTGTLLEQF
DKKHWQVQLGILKMKVPTDEMEKIKPSKQSAAQRPVVKVSGGGMSGPSTTLDLRGERYDQ
AMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYGFAPQNAGGSGA
TIVNFK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagattttaaaaacccttgaatacgacaagattcagcaagcattgttgggt
caggtcgtgacagcaaatggccgccagctggtgcaggccatgcagccgctgaccgatcca
gtcgccgtacaacaggcactagatgaaaccgcagacggcgcatcggcgttgcgattaaaa
ggcggcattccggtgccgcaactcgagaatattgatccggcgcttaaacgagtcgacatt
ggggccgttttgaatggtcaagaactagccagcatcagccgtgtcttgcaaacggtgagt
gccattgataaatttttgactgatttacaggatcagattgattttcgccagctttacaca
cttcaagaatcgttaaccgtgttaccgcaattatcacggcgcttgaagacagccgttgat
cctgatgggacattgaccgatgaggctagtcctcagctgcatggtgttcgtgaacagatc
aaaagtattgaaggcaagatccgcggtaaaatgacaaattatactcgcggcgcccaatca
aagtatttaagtgacccgattgtgacgattcgggatgatcggtacgtgattccggttaag
gctgagtatcgcgccaaatttggcggtgttgtccatgatcaaagtgcgaccggccaaacc
ttgtttattgaaccgcaagtaattgtcgccttgaataatcgactccgtgaggcacaactg
gccgaggtagctgagattaaccgcatcttagccgaattgtctaatgaattagcgccttat
accggtcaaatcaaggcgaatgcggcggttcttgggcattttgacttcatcaatgcgaag
gcgagattagccaaggcggaaaaagcgacagagccgttagtgtcggctgataatgacgta
ttgttgcgtgatgctcggcaccccttgatcgacccgcataaggtggttggcaacgatatt
ccgttgggcgacaagtaccaagctatggttatcaccggcccgaataccggtgggaaaaca
atcaccctcaaaacattaggactgttgcagttgatggggcagtccggattgtttattcca
gctgatgatgaaagtcgtatcggcattttcgatgaagtctttgcagatattggcgatgaa
caatccattgagcaaaatttgtcgactttttctgcacatatggacaatattgttcatatt
ctcaaacaattgtcacagaatagtttagtgctgtttgatgaacttggcgccggcactgat
ccgcaagaaggtgcggcgctggcgattgcgatcttggacgcagtgggtgaagttggcgcg
tatgtagttgccacgacccattatccggaattgaagttgtatgggtacaatacagcaaag
acgattaacgcatcgatggaatttgacagcaaaacgctgcagccgacttatcgccttttg
gtcggggtacctgggcgctcaaatgcgtttgatatttctgcacgtttggggttgccgagc
gtgatcgttgagcgtgctaagtcaatgatcagctcggacagccatgagctgaataatatg
atcagcgacttggagaaacagcgaaaggcagcggaaaccgcttatgaagccgctcgtcgt
cagctagccgatgcacagtctgtccatgacgagctagcggcagcctacaagaagttcaca
acggaacgcgatgcccagttgcagcaggctaaggacaaggccaactcgttggttgacaag
gcccaaacgaaggccgataaaatcatcaagcaactgcgccaaatgcaattgacgaatccg
ggaactgtgaaagagaatcaattgattgctgccaaaacggcgcttaaacaattgcatcaa
gacgagccacttcagaaaaatcgcatcttgcgccgtgaacgtgagaaacaggcattgcat
gttggtgatgaggttaaagtggcaagttacgatcaaactggtaccttgctggagcaattc
gataagaagcattggcaggttcaactaggcattttgaaaatgaaggtaccaactgatgag
atggaaaaaatcaagccaagtaagcaatcagcggcgcaacgtccggttgtcaaagtaagt
ggcggcgggatgagcggcccatcgaccacgctggatttgcgcggcgagcggtatgatcag
gcgatggcggatttggatcaatacattgatgccgccttattggccggttatccatctgtg
acgattattcacggactgggcactggcgcgattcgcaacggggtgacccagtatcttaaa
cgcaatcggcaggttaaaacgtatggctttgcaccacaaaatgccggtggttcaggagct
accatcgtaaactttaagtag
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