Lacticaseibacillus paracasei BD-II: LCBD_0879
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Entry
LCBD_0879 CDS
T01955
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcs02000
]
LCBD_0879
Transporters [BR:
lcs02000
]
Other transporters
Pores ion channels [TC:
1
]
LCBD_0879
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
CLPTM1
Meckelin
Motif
Other DBs
NCBI-ProteinID:
AEA56377
UniProt:
K6SHY2
A0A806E2B7
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All DBs
Position
complement(853393..854277)
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AA seq
294 aa
AA seq
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MIHMIVTATTVNEQTNVWLKYFTTIDWDKIVGTFIDKVLSLLFFTVLFLILYRLGRFALN
RTFKSYQRRAHLTGTRVKTIHALSVNVFFYLVLFFYLYAILSILGVPVGTLLAGAGVVGL
AVGFGAQGFVNDVVTGFFILLEAQFDVGDVVKLGTISGTVTNVGLRTTVVKSSDGTVNFI
PNRNITIVSNLSRSNMQVLIKLPLAPSADLDLVRKTIERVNQDLVPKFTTITEEPDILGL
TEEKNGAFTYQVLFYAENGEQVSLQRTFLGAYVAALNSAGIKVVTPPLNLQSGS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtgatacacatgatcgtcacagcaacaaccgtcaacgagcaaaccaacgtttggctgaaa
tattttacaaccatcgattgggataaaatcgtaggcacttttatcgacaaagtgctgtcg
ttgctgtttttcaccgtcttatttttaattctgtaccggctcggccgctttgcgctcaat
cgcacctttaaaagctatcaacgacgggcacatctgacaggcacccgggtcaaaacaatt
catgcgttatcggtgaatgtttttttctatctggtgctcttcttctacctttacgccatc
ttatcgattctcggcgtaccagtggggacactgttagccggtgctggggttgtgggtttg
gcagttggttttggggcacagggatttgtaaacgacgtcgtgaccggcttcttcatcctt
ttagaagcacaatttgatgtcggggatgtcgtcaaactcggcaccatctctggtaccgtg
accaatgtcggtttgcggacgacggtggtgaagagttccgatgggactgtcaatttcatt
cccaatcgcaacatcaccatcgtcagcaacctttcgcgaagcaatatgcaggtgctgatt
aaattgccgcttgccccaagtgctgatctcgatctagttcggaaaaccattgaacgtgtg
aatcaagatttggtaccgaaatttacaaccattaccgaggagcctgacattcttgggcta
actgaagaaaagaatggtgctttcacctatcaggttcttttttacgccgaaaatggcgaa
caagtgagcctgcaacgcactttcttaggcgcctacgttgctgccttgaattctgcaggc
ataaaagttgtcacaccgccgttaaacttgcaaagtggttcatga
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