Lacticaseibacillus paracasei BD-II: LCBD_1147
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Entry
LCBD_1147 CDS
T01955
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03030
DNA replication
lcs03430
Mismatch repair
lcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCBD_1147
03430 Mismatch repair
LCBD_1147
03440 Homologous recombination
LCBD_1147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcs03032
]
LCBD_1147
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1147
Enzymes [BR:
lcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCBD_1147
DNA replication proteins [BR:
lcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCBD_1147
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCBD_1147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEA56645
UniProt:
A0A5Q8BSN4
LinkDB
All DBs
Position
complement(1113349..1113891)
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AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDRVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaaccgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaagtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcgagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcgccgcgctaccaggtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttgcacattccg
cttgagcatcaccacaatgctttggcggatagttatgcctgcgcacgaattttgatcgcc
gaaaatgagcactttggcgaagcccggattaaaagcatgatgaagctttcaaaagcgggt
tga
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