KEGG   Lacticaseibacillus paracasei BD-II: LCBD_1170
Entry
LCBD_1170         CDS       T01955                                 
Name
(GenBank) General secretory pathway protein E
  KO
K02243  competence protein ComGA
Organism
lcs  Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:lcs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lcs02044]
    LCBD_1170
Secretion system [BR:lcs02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LCBD_1170
SSDB
Motif
Pfam: T2SSE nSTAND3 AAA_25 AAA_16 AAA_14 AAA_22 AAA AAA_7 NACHT ABC_tran AAA_29 ResIII TsaE SRPRB AAA_5 cobW NTPase_1 AAA_33 AAA_18 NB-ARC AAA_30 Rad17 YqeC ATPase_2 MobB RNA_helicase SRP54 AAA_2 AAA_28 AAA_11 Zeta_toxin AAA_24 DnaB_C AAA_23 DO-GTPase1 AAA_8 RsgA_GTPase CbiA
Other DBs
NCBI-ProteinID: AEA56668
UniProt: K6QL04 A0A806E2B5
LinkDB
Position
1138272..1139138
AA seq 288 aa
MQSVNKLLTIALEKGASDIYYLPSPQGYLIRLRVPTGLVTIAERDSKRGQQEINYLKFMA
GMNVAEHRRVQLGAFYQKESAAFLRLSSVADFRGGESLVVRIIKGIPDAAGARHLLDRLL
GILLQKRGMLTLAGPTGSGKTTLLYQLATRLAESRMVLSIEDPVEINQPQFLQLQVNPEA
DMTYPQLLKAALRHRPDVLLIGEIRDRQTAQSACEAAISGHIVLATVHARSAADTPLRLS
SFGLPDELVAAALTASAAISLQYRPMIHPVAEVVVFKQVGQADQEVVS
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcaatcggtgaataagcttttgacaattgcgctggaaaagggtgctagcgatatttac
tatttgcctagtccgcaaggttatttgattcgcctacgggtaccgacgggcttggtaaca
atcgccgagcgagacagcaaacgtgggcagcaagaaattaattacttgaaatttatggcg
ggcatgaatgttgccgaacatcgccgcgttcaattgggagccttttatcaaaaggaatca
gcagcttttttacggttaagttcagtggctgactttcgcggtggtgaatcactggtagtt
cgcataatcaaaggcattccagatgctgcaggcgcacgtcatctgttagatcgtctgttg
ggtattttactgcagaaacgcggcatgctgaccctagctgggccgactgggtcaggaaaa
acgacattactctatcagttagcgacgcgtttggcggaatcacgaatggtcttgtcgatc
gaggatccagttgagatcaatcagccgcaattcttacagttgcaagtcaatccggaggca
gacatgacctatccgcaattactgaaggcggcgctgcgccatcgaccagacgtcttgctg
attggagaaattcgtgatcgacaaacagcgcaaagtgcttgcgaagcggcgattagcggt
catattgtcctagcgaccgtgcatgcccgatcagcggcggatacaccattaaggctgagc
agttttggcttgccggatgagttagtagcggcggcattgacggcgagtgcggcgatcagt
ttgcagtatcggccaatgattcacccagtggcggaagtcgtggttttcaagcaagtagga
caagctgatcaggaggtggtttcgtga

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