Lacticaseibacillus paracasei BD-II: LCBD_1507 Help Entry LCBD_1507         CDS       T01955                                  Name (GenBank) Beta-lactamase   KO K12574   ribonuclease J [EC:3.1.-.-] Organism lcs  Lacticaseibacillus paracasei BD-II Pathway lcs03018   RNA degradation Brite KEGG Orthology (KO) [BR:lcs00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     LCBD_1507  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lcs03019]     LCBD_1507 Messenger RNA biogenesis [BR:lcs03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      LCBD_1507 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 DUF4453 Motif Other DBs NCBI-ProteinID:  AEA57004 UniProt:  A0A1J3C267 LinkDB All DBs Position complement(1447962..1449644) Genome browser AA seq 560 aa AA seqDB search MKLNIKNNETAVFAVGGLGEIGKNMYGVQFQDEIIVIDAGIKFPEDDLLGIDYVISDYSY LVQNKDKIKALVITHGHEDHIGGIPYFLQQVPNVPIYAGPLAAALIRGKLEEHGLLRTTK LTEINEDTVLKFKKLSVEFFRTTHSIPDTLGIAVHTPQGIVIQTGDFKFDLTPVGDQPSP NFQKMCRFAEEGVLVLMSDSTNAEVPTFTKSERFVGKSIRHIFDRIDGRIIFATFASNIS RIAQAADAAMAHGRKIAVFGRSMETAMVNGRELGYLNIPDDVLIDAHQLNSMPADKVMIL CTGSQGEPMAALSRIANGTHRQISIQPGDTVIFSSNPIPGNTVSVNHVINQLSEAGAEVI HGKVNNVHTSGHGGQEDQKLMLRLIKPKFFMACHGEYRMQKIHCELAQQCGVPEKNCYIM ENGDVLALTQDSARIAGHFPAGDVYIDGNGVGDIGNAVIRDRRMLSEEGLVVVVATINMQ KQAVLAGPDLLSRGFIYMRESGELINQAQRRVYRTIKSTFSSSEKVTEASLKDAITSNLQ EFLFDKTERHPVILPMLILL NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgaaattaaatattaagaataacgaaaccgccgtctttgctgtcggcggtttaggtgaa attgggaagaacatgtacggggttcaattccaagatgaaatcatcgtgattgatgcaggg atcaagttccctgaagatgatctgcttgggattgattatgtcatttccgattattcctac ttggttcaaaacaaagacaagatcaaagcactggttattactcacggacatgaagatcat attggtggtattccctacttcttacagcaggtaccgaatgtgccaatttacgctggtccg ttagcagcagctttgattcgtggcaaacttgaagaacacggtttgttacgcactaccaaa ttaactgaaattaacgaagacaccgtgttgaagttcaaaaaacttagtgttgagttcttc cgcacgacccacagtattccggatacgctgggcatcgcggttcatacaccgcaaggcatc gtcattcaaaccggggacttcaagtttgatctcacgccggttggcgatcagccatcccct aacttccaaaaaatgtgccggttcgccgaagaaggcgtgctggtactgatgtcggattcg accaacgcggaagtaccgacatttactaagtcagaacgatttgttggcaagtcaattcgc cacatttttgatcgaattgatggtcgcatcatatttgccacctttgcgtcaaacatttca cggatcgcccaagcagctgatgcggcaatggcacacggtcgtaaaattgctgtttttggc cgttcaatggaaactgcgatggtcaatggccgcgaacttggctaccttaacatccctgat gacgtcttgattgatgcccatcagcttaattcgatgccagcagataaagtgatgatcctc tgtaccggttcacaaggcgaaccaatggcagcgctgagccgaattgctaatggcacgcat cgacaaatcagtattcaacctggggataccgtcatcttctccagtaatccgattcccggc aatactgtcagtgttaatcacgtgatcaatcagctaagtgaagctggtgccgaggttatc catggcaaggtcaacaacgtccacacttccggtcacggaggtcaagaagaccagaagctt atgttgcggctaatcaagccaaaattctttatggcttgccatggtgaatatcggatgcaa aagattcattgcgaacttgcccaacaatgcggcgtccctgaaaagaattgctacattatg gaaaacggcgatgtattagcccttacgcaagatagtgctcgaattgccggtcacttccct gctggcgatgtttacattgatggtaatggtgtcggcgacatcggtaacgctgtcattcgc gatcggcgcatgttgtctgaggaaggcttggttgtggtcgttgccacgatcaatatgcaa aaacaagcggtcttagctggtcctgatctgctttctcgcggcttcatctatatgcgtgaa tccggcgagttgattaatcaggctcagcggcgcgtctatcgcaccattaagtcaaccttc tcaagcagtgaaaaggtgacggaagctagcttaaaagatgcaatcaccagcaacttgcaa gaatttttgttcgacaaaacagaacgacacccggttattttaccgatgctgattttgctc taa

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