Lacticaseibacillus paracasei BD-II: LCBD_1578
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Entry
LCBD_1578 CDS
T01955
Name
(GenBank) Hydroxymethylbutenyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LCBD_1578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lcs03011
]
LCBD_1578
Ribosome [BR:
lcs03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LCBD_1578
Bacteria
LCBD_1578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AEA57075
UniProt:
K6QFT6
LinkDB
All DBs
Position
1525018..1526337
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AA seq
439 aa
AA seq
DB search
MSDNNVNENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELS
TQPIDDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETI
TAPVTSVVKGGLVVNAGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILS
HRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVD
KPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTT
FGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQ
ERPAGSEEESHEGGNSSRDNSDRGDRRRSSRPRRGNDRHQSTSIPAEYQQDDSGFSLGDI
LGDALKDAAKGNDDQDDNK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataataacgttaatgagaacaccgaaacaatggcggacgcccttaagagtgtc
accacagtaaagattggtgataccgtcaaggcagacgttcttgccgttgaagataaacaa
ttgatcgttgggatcgaaggaacaggcgtcgaaggcgtggtcccgatcaaggagttatca
actcagccaatcgatgacattcacgatgttgcaaaagtcggcgacaagcttgatttagtt
gtgctttcaacggttggcaaagataaagagaatgggcagttcctgctgtccaagcgccgt
ttggaagcgcaaaaggtttggaaagaaatccaagctaagtatgaagcaggtgaaaccatc
accgctccggttaccagcgtcgttaaaggcggactggttgttaatgccggtgttcgtggc
ttcgttcctgcatccatggttgaagatcattttgttgaagatcttagccaatacaagggt
aaggaacttgaattcaagatcattgaaatcgaaccaagtgaaaatcgtctgattctttca
catcgtgcgattgttgaagccagcaaggctgaagcacgcaaggaaatctttgcgaagatt
caacctggcgataccgttgaaggtaaagttgctcgtttgaccaactttggcgcctttgtt
gatcttggcggcgttgatggtttggttcacgtttcagagatttcgtttgatcatgttgac
aagccaagcgatgttctgaaggttggtcaagaaatcaaggttaaggttctgaacgttgat
cctgatcgcaaccgcatttccttgtccatcaaagcaacgttgccacaaccttgggacgac
attgaagaaaaggcaccggccggctctgttttgactggtacagttaaacgtttgaccact
tttggtgcctttgttgaagtcttccctggtgttgaaggtttggttcatatttcccagatc
tctcacgaacacgtagcaaccccagcggatgtccttaaggaaggccaagaagtgcaggtc
aaggttctttccgttgaccctgatgcacatcgtcttgctttgtccatcaaggctttgcag
gaacgtccagcaggttctgaagaagaatctcatgaaggcggcaacagcagtcgtgacaat
agcgaccgtggtgaccgtcgtcgttcttcacgtcctcgtcgtggcaatgatcgtcatcaa
tccacgtcgattcctgctgaatatcagcaagatgattcaggcttctcacttggcgacatc
ttaggcgatgccttgaaagatgctgctaagggcaatgatgatcaggatgataacaagtag
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