KEGG   Lacticaseibacillus paracasei BD-II: LCBD_1610
Entry
LCBD_1610         CDS       T01955                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
lcs  Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:lcs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcs03032]
    LCBD_1610 (gyrB)
   03036 Chromosome and associated proteins [BR:lcs03036]
    LCBD_1610 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcs02048]
    LCBD_1610 (gyrB)
Enzymes [BR:lcs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LCBD_1610 (gyrB)
DNA replication proteins [BR:lcs03032]
 Prokaryotic type
  DNA Topoisomerases
   LCBD_1610 (gyrB)
Chromosome and associated proteins [BR:lcs03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LCBD_1610 (gyrB)
Prokaryotic defense system [BR:lcs02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LCBD_1610 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AEA57107
UniProt: A0A508YDG1
LinkDB
Position
1558096..1560108
AA seq 670 aa
MDKATQAYNDSSIQVLHGLEAVRKRPGMYIGSTDGRGLHHLVYEIVDNSVDEALAGFGDE
INVTIHADNSVTVQDHGRGMPTGMHPSGKPTIEVILTVLHAGGKFNQNSYKTSGGLHGVG
SSVVNALSESLTVRVVRDKRAFEEHFINGGHPDGSLQKLGKVNEPNGTTITFKPDPTIFQ
TTVFSYDTLAERLRESAFLLKNITINLTDERTGKHDSYHYPDGLVSFVKYLNEGKDALSQ
VINFEGKKDGIVVDFAGQYNDGYSENLISFVNNVRTGDGGTHEIGLRSGMTRAFNEFARK
VGLLKERDKNLEGSDVREGFAGILSVRIPEEILQFEGQTKGKLGTPQARTVVDGIVYDKL
STFLMENGEESQELVRKAVKARDAREAARKARDDSRTGRKRKKDQGLLSGKLTPAQTKNP
KRNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTQKAKLQDIVKNEEINTMIYTIG
AGVGADFDLQQANYDKIIIMTDADTDGAHIQILLLTFFYRYMRPLIDAGRIYIALPPLYR
LQKGAGAKTKISYAWTDEELAKETKAMGKGYTLTRFKGLGEMNADQLWETTMNPETRTLI
RVRIDDAQLAERRVTTLMGDRVEPRREWIEHNVKFDMDDDGSILETPTANHEKLQFGAKQ
IVKQLDKKGK
NT seq 2013 nt   +upstreamnt  +downstreamnt
atggataaagcaacgcaagcatataatgattcatccattcaggtgctgcatggcttggaa
gctgtgcggaagcgtccagggatgtatattggatccaccgatggccgcggtttgcatcac
ttggtctatgaaatcgtggacaattctgtcgatgaagcgctcgcggggtttggggatgag
atcaatgtgacgattcacgccgataactctgtgaccgtacaggatcatggtcgcgggatg
ccaacggggatgcacccgagcggcaaaccgacgattgaagtcattttaaccgtgctacat
gccggcggaaagtttaaccaaaatagttacaaaacttctggtggtttgcatggggttggc
tcaagcgtcgtcaatgccctatcggaatcattaaccgtgcgagttgtgcgggataagcgc
gcatttgaagaacatttcatcaatggcggtcatcctgatggcagtttgcagaagttgggc
aaagtcaacgaaccgaatggcacgaccatcacgtttaagccggatccgactatttttcaa
accactgttttcagttatgataccttggccgaacggttacgcgaatcagcctttctactg
aaaaatatcacgattaatctgacggatgaacgcaccggtaagcacgacagttatcactat
cctgatggtttggtcagctttgttaaatacctcaacgaaggcaaagatgcattgtcgcag
gttattaattttgaaggcaaaaaggacggtatcgtggttgattttgccggccaatataac
gatggctattctgaaaatctgatttcgtttgttaataacgttcgcactggtgatggcggg
acgcatgaaattggcttgcgcagcggcatgacgcgagcattcaatgaatttgcccgaaaa
gtcggcttgctgaaggaacgcgacaagaaccttgaaggcagtgatgtgcgtgaaggtttt
gcaggtattttaagtgtccgcattccagaagaaattttgcaatttgagggccagacaaag
ggcaagcttggtacgccgcaagcccgcactgtggtcgatgggattgtctatgacaagctg
tcaacttttttgatggaaaacggtgaagagtcgcaagagttggttcgtaaagccgtcaaa
gcccgtgatgcgcgggaagcggctcgaaaagcgcgcgacgatagccggacgggacgcaag
cgcaagaaggaccaaggtttgctttccggtaaattgaccccggcgcaaaccaagaaccct
aagcgtaacgaattgtatctcgtcgaaggggattctgccggtggttcagctaaacaaggc
cgagaccgaaagtttcaggcgatcttgccattgcgagggaaagtactgaatacccagaag
gccaagttacaggacatcgttaaaaacgaagaaatcaatacgatgatttacaccatcggc
gctggtgtcggtgcggattttgatctgcagcaggccaactacgacaaaatcattattatg
actgatgcggatactgatggcgcgcatattcagattttgctactaaccttcttttatcgc
tacatgcggccgctgattgacgcaggccgaatttacattgctttgccaccattgtatcgg
ctgcaaaaaggcgctggtgctaaaaccaagatcagttatgcttggaccgatgaagagttg
gccaaagaaaccaaggccatgggcaagggttacacattgacccgatttaaaggacttggg
gaaatgaatgccgaccagctttgggaaacgactatgaatcctgagacgcggactttgatc
cgggttcggattgacgatgctcagctggcggaacgacgcgtgaccactttgatgggtgat
cgcgttgagccgcgtcgtgaatggattgagcataacgtcaagtttgatatggatgacgac
ggcagtattttggaaaccccgactgctaatcacgaaaaattacagtttggtgccaagcaa
atcgtcaaacaactggacaagaaaggaaagtaa

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