Lacticaseibacillus paracasei BD-II: LCBD_1694
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Entry
LCBD_1694 CDS
T01955
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1694
Enzymes [BR:
lcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCBD_1694
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCBD_1694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
DUF2059
AAA_16
Herpes_ori_bp
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEA57190
UniProt:
A0A422LKS8
LinkDB
All DBs
Position
complement(1645907..1649611)
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AA seq
1234 aa
AA seq
DB search
MTQFTTSQQAAITHDGHDVLVSASAGSGKTTVLVERIIQKILKQHADITRMLIVTFTRAA
TAEMRTKIQTALKKALTERRHELSGEDRRHLANQIAMVNAAKISTLDAFSLQIVQTYYYV
IDLDPGFRLLTDETERYMLQERVWDDLREQLYASDEAPAFEQLTANFSGDRDDSGLQDLM
FELIRQAGATTDPKAYLEGLATPYAPEKWEATFSQQIWPRVKGQLLQIATSLTQASALAN
QLPNPIWYQQIQADLAPLQTLLETNAPTYDTVRSVLISHEFAAWSRISKGLDDADKDTKN
AAKDLRDAAKKTWQNKLAPTFALAAEQIGDLLREAQPLVATLANVALKFEDALTAEKAAR
HVQDYSDIAHNALRILQQKDPQTGAPIADNYRASFDEVMVDEYQDISPLQEALLAAVSTT
TPGDRFMVGDVKQSIYGFRLADPQLFIHKYQTFQDAPTDPAAPERIILAENFRSTKNVLA
FTNLIFSQIMDPEVGDLSYDNAAALRYGALDYGDAHPAVKVLLYSKATSDEDSSDASELP
GDADDNEPVDIATGQTQLVLAEIQRLINDPDAQLWDRQAQEYRRIHYRDITLLTRQTSQN
SLIQTQFAAAGVPLFVADTKNFFKTTELMVMLALLKVIDNQKQDIPLVAVLRSPIVGLSA
DQLALIRLAAKQVPYYDAVTAFLQAEPKTPLAQRTHDMLTHFFNQLSHFRDLARENDLVT
LLWAIYQDTGFLDYVGGTPGGSQRQANLQALIDRARTYEAGGFKGLFAFIHFITLMQKQD
QDLAMPAQVDPDNDAVKLMTIHKSKGLEFPVVFLMQANKHFNMRDQTGTAILTKQGIGIK
WLDPETRVEYELPQYQAAKAARQNQTLAEEMRLLYVALTRAQQRLYVVGATMSGNQLTSA
DKTVEKWAAAAEGEARVLAPQVRSGATSYLDWIGPALIRHPQARGLAETTIKPALVGDET
EFTIEIDVNPQVTPTATPEKVSDDSGTMVDLSAWFKKAYPFQAATTTTGFQSVSEIKRAF
DDPDTIDLVNADRFLGPKPPMRDLTAPAFLTETPSGISPAAIGTATHLLLQLVDLAKPIT
MASLRALRDQLTTKQVIAVDVAKHIDLTALIRFFETDLGRLLLAKPQQVHREVPFSMLLP
ADQVFEALADDPGEDVLIHGIIDGYVSDEQGVTLFDYKTDHNPNTAVLVDRYRGQLNLYA
QALQDLQPKPVLHRYLVFLRTGTVVDLVASGAGK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatttacaacctctcaacaagcagcgattacccacgacgggcatgacgtgctg
gtttccgcatctgctggtagcgggaaaaccaccgtgttggttgagcgaattattcaaaag
attctcaaacagcatgccgacattacccggatgttgatcgtgacatttactcgtgcggca
acagccgaaatgcgaaccaagattcagacggctttgaagaaggcgctcaccgagcgacga
catgagcttagtggtgaggatcggcgtcatcttgccaatcaaattgccatggttaatgcg
gctaaaatcagtacgctggatgcctttagtttgcaaattgtccaaacttactactatgtc
attgatcttgatcccgggtttcggttgcttacggatgaaactgaacgctacatgctgcaa
gagcgcgtttgggacgatttgcgtgaacaattatatgccagtgacgaagcacctgcgttt
gaacaactcactgctaattttagcggggatcgagatgatagcggtttgcaagacttgatg
tttgagttgatccgccaagccggtgcgacaactgatcccaaggcctatttggaaggattg
gcaacgccgtatgcaccggaaaaatgggaagcgacctttagccaacaaatctggccgcga
gttaaaggccaattgctgcaaatagccaccagtttgactcaggcgtcagcgttagccaat
caactgccaaacccaatttggtatcagcaaattcaggctgatcttgccccattgcaaaca
ctattagaaacaaatgcacccacatacgatacagtccgcagtgtcttgatttcccatgaa
tttgctgcttggtcgcgcatcagtaaaggactggatgacgcagataaggacactaaaaac
gcggcaaaagatctacgtgatgctgcaaagaaaacttggcagaacaaactggcaccaact
tttgccttagctgctgagcaaattggcgatttgttgcgggaagctcaacctttagtagcc
acattagctaatgtggccttaaagtttgaagacgcgttgaccgctgaaaaggccgctcgg
catgttcaagactatagtgatattgcgcataatgctttacgcattttgcaacaaaaagat
ccacaaaccggtgcaccaattgccgataactatcgcgcgagtttcgatgaagtgatggtg
gatgagtatcaggacattagtccgttgcaggaggctttacttgccgctgtcagcaccact
acgccaggtgatcggttcatggtcggggatgtcaaacagagtatttacggcttccgactg
gccgatccgcaactatttattcataaataccaaacatttcaagatgcaccgaccgatccc
gccgcgccagaacggattattttagctgagaattttcgctcgaccaaaaatgtgttggcg
tttaccaatctgattttcagtcaaatcatggatccggaagttggcgatttgagctatgac
aacgcagcagctttaaggtatggtgcgcttgattacggtgatgcgcatccggcagtgaaa
gtgttgttgtatagcaaagcaacatctgatgaagattcttctgatgcaagtgagttaccg
ggagatgctgatgataacgagccagtggacattgcgactggccaaacgcagctagtcttg
gccgaaattcagcgattaatcaacgatcccgatgcgcaactatgggatcgtcaggcgcag
gagtatcggcgcatccactatcgcgatatcacattactgacgcgtcaaaccagtcaaaac
agtctgattcaaacacagtttgctgcagcaggcgtcccattgtttgtggccgataccaag
aattttttcaaaacgactgaattgatggttatgctggcgcttttaaaagtgattgataac
caaaaacaagatattccgttagtggctgtgttgcgttcgccgattgttggtttgtcagct
gatcagttggcactgattcgtttagcggcaaaacaggtgccatattatgatgccgtgaca
gcatttctacaagccgaaccaaaaacgccacttgctcagcggacgcatgacatgctgacg
cacttcttcaaccagctcagccattttcgcgacttggcccgagaaaatgacttggtcact
ttgttgtgggctatctatcaggataccggatttcttgactatgttggcggcaccccaggg
ggcagtcagcgccaggcaaatctccaagccttgattgatcgagcccgcacttatgaagcg
ggtggcttcaaagggttatttgcctttattcactttattactttgatgcagaagcaggat
caagatttggcaatgcctgcccaagtcgatccagataatgatgcggtgaagttgatgacc
attcacaaaagcaagggtttggaattcccggttgtctttttgatgcaggcaaacaaacat
tttaatatgcgcgatcaaaccggcactgccattttgacaaaacaaggtatcggtattaaa
tggctagatcctgaaactcgcgttgaatatgaattaccccagtatcaagctgccaaagct
gcacggcaaaatcagaccttggctgaagagatgcggttgttgtatgttgctctgacgcgt
gcgcaacagcgactttacgtggttggcgcaacgatgagtggcaatcagctgacgtctgct
gataaaacggtcgaaaaatgggctgcggcggcggaaggtgaagcgcgtgttttggcgccg
caagtccgcagtggggcaacgagctatctcgactggatcggaccggccttgatcagacat
ccacaggcccgtgggttagccgaaacaactatcaaacctgcgctcgtcggtgatgaaacg
gagtttacaattgaaattgacgtgaatccgcaagtcacaccgactgcaactccggaaaaa
gtttctgacgattcaggaacaatggtcgacttatctgcgtggtttaaaaaggcctatcct
ttccaagcagcaacaactacgacaggttttcaaagtgtttcagaaattaaacgcgcattt
gatgatccagataccattgatctggtcaatgcagatcggttcctcggtcccaagccaccg
atgcgggatttaacggcgccagcgtttctgaccgaaacccctagtggcatcagcccagca
gctattgggacggcaacgcatctattgctgcagctagtggatctcgccaagccgatcacc
atggccagcttgagggctttgcgcgatcaattgaccaccaagcaggtcattgcggtcgat
gtggcaaagcacattgatttgacggcacttattcgcttctttgaaactgatttaggtcgg
ttgttattggctaagccgcagcaggttcatcgtgaagttccgttttccatgctgctgcct
gctgaccaggtttttgaagcattggccgatgacccaggcgaggacgtcttgattcacggg
attattgatggatacgtgagtgatgaacaaggcgtcacgctgtttgactacaaaactgat
cataacccgaacacggccgttttagtggatcgttatcgtggacagttaaacttatatgca
caagctttgcaggatttacaacccaaaccggtgctgcatcgctatctggtctttttgcgc
accggaaccgttgtcgatctggtagcatcaggtgctggtaaatag
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