Lacticaseibacillus paracasei BD-II: LCBD_1695
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Entry
LCBD_1695 CDS
T01955
Name
(GenBank) Putative ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1695
Enzymes [BR:
lcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCBD_1695
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCBD_1695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEA57191
UniProt:
A0AB38QAS1
LinkDB
All DBs
Position
complement(1649608..1653147)
Genome browser
AA seq
1179 aa
AA seq
DB search
MGLQFILGDATTDHAGTMATMVQANLQADSQNQIFYLVPNHIKFEAEVDLLKRLRAQAAS
VNGVYAQNRVQVLSFSRLAWYFLKNTALYQQPRLDRASNTMLVAKILGESKEELTIYAGE
AHNTGFVTQLADQLSELVTGRITAEDLNTTVAALTPGDRHRAKLRDLGIILDHYEAEIGP
YATNASLLSGLQQVMRNQDLSHTFIYLNDFNVFSASETGLVETMIETAAEVTVSLVLNKP
YPAAPPVAPNLFLPAGRLYHRLYQKAKTMKVPIRLDRFAKPRPLSEGMNHLADWWQTSTN
LQPQAPAQTAQNKEVELAVATDPYHELRTVARQIYQAVRQGARYRDFLILARRLDPYAAV
IPAIFEEFNIPQFTDLERPMKDHPLVVLIESLFAIQDHDYQYQDVMRLLHTELLLPENMD
IAAFRDALDTTDNHLVRTGITGKKRWTQTDPWRYFQRNPNADDSQLDPEADKTAQINAIK
TLVADTVPQLLRQWQTAKTGREAAASLYQWLQTTGVIDQLNVWRQTANADGDLSRSQANE
QAWDTFTQLLNDYATILGEADFNRDQFRELLAAGFASATYTQIPSTLDSVVISETGLVRL
AKAKHVYVIGATNTAMPDVPNDSGVLNSEERQLLAAQLPDDRFLPEQGPTTTLGDPFINY
LGFMAASEKLTLSYPMQNTQENSENQASPYFRQLAQALQLTPATWAPAGLGTSLKAVLGS
PRAMLSDFVRAAGEAQHQKLPLSRSWQGVLASLKQTKLAPLAQKLAGSLTYQNNPGRLDP
TLAVQLYGRDMNVSVSRLETYYRNQFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDQY
LTQLRDAGQTLADVTAADVAAAVPPLVAAITKRPGYEILGSTHRMAYLTSRLSRLLIQVL
TNMRQQQRRTGFRPMRTELQFGQIGDTRGLPGLSWPLPHGGRVNVRGKIDRLDVYRESDA
QRFMVVDYKSTQHRFDDSDAYYGIALQMLTYVEAMANVPADPPFVPAGALYFHLQDPKFK
FSTDLDLDIDRLKAFKYLGFLVAKDGADLAAVDKTISAETGGRSMMVPLGFKKDGAFNYN
QSNILTPEDLSAYLLHNQALIIDAASRILAGDIALAPFQYGQESTVISNSDYQSIMLFDP
ATGFDHYNHVPKLKRKEVLGRVTTDPTQIPHHRQEDSQA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcaattcattttaggagacgcaacgacggatcatgctggcacgatggcgaca
atggttcaagctaatctgcaagccgattcacaaaaccaaattttttatttagtccctaat
catatcaaatttgaagccgaagtcgacttgttgaaacggttgcgggcgcaagcagcatcc
gtcaatggtgtatatgcgcaaaatcgagtgcaggtgctgtctttctcacgacttgcctgg
tatttcctgaaaaacaccgcgctttatcaacagccacgacttgatcgggccagtaacacg
atgttggtcgcaaagatactaggtgaaagcaaggaagaactaacgatttatgctggcgaa
gcgcataacactgggtttgtgacacaactggcggatcaattaagcgaattagtgaccggt
cgtatcacagcagaagatctgaatacgacagtagccgctttaacaccaggcgatcggcac
cgtgctaaattgcgagatctggggatcattctggatcactatgaagcggaaatcggccct
tatgccactaatgccagcctactaagtgggttgcaacaggtgatgcgcaatcaggacctg
agccacacattcatttatctcaatgacttcaacgtcttttcagcttcagagactggattg
gtcgaaacaatgattgaaacggctgctgaggtgaccgttagcttagtgctgaacaagccg
tatccggctgcgccgccagtggcacctaatttattcttacctgcaggccggttgtatcac
cgcctttatcaaaaagccaaaacgatgaaagtaccgatccggctagatcgttttgctaaa
ccgcgtccgctaagcgaaggcatgaatcaccttgctgattggtggcaaacgagtaccaat
ttacaaccacaggcgcctgcacagacagcacagaacaaagaagttgagttggcagtggcg
actgatccatatcatgaattacggacggttgcccgccaaatctatcaagccgtccggcaa
ggtgcacgttaccgcgattttctgattttagcccgtcgtttggatccatacgcagcggtg
attccggccatctttgaagaattcaacatccctcaatttactgatctcgaacggccaatg
aaggatcatccgctagtcgtactcattgaaagtctttttgccatacaagaccacgattat
caatatcaggatgtcatgcgccttttgcataccgagttgttactacctgagaatatggat
atcgcggcttttcgtgatgctttagacacaacagataaccatcttgttcgcactggcatt
accggcaaaaaacggtggacacagaccgacccatggcgctattttcagcgcaatcctaac
gctgacgattcgcaacttgatcccgaggcagataaaactgcccaaattaatgcaatcaag
actttggttgcggacacggttccgcaattgctgcgtcaatggcagactgccaaaactggt
cgcgaagccgcggccagcttatatcaatggctgcaaacgactggtgtgattgatcagctg
aatgtgtggcgacaaaccgctaacgctgacggtgatttaagtcgcagtcaagccaacgaa
caggcttgggataccttcacccaattgttaaatgactatgcgaccattttgggagaagct
gacttcaatcgtgatcagtttcgagaactgttggcggccggctttgctagtgccacctac
acgcagattccgtcgacgctggactcggtggttatttccgaaacgggtttggttcgtttg
gccaaggcaaaacacgtttatgtgattggcgcaacaaacaccgcgatgcctgatgtgcct
aacgatagtggtgtcttaaatagcgaagagcgtcaactgttggcggctcagcttccagat
gaccgttttttacctgaacaaggtccgaccacaaccttaggcgatcctttcatcaattat
cttggatttatggcagcttctgaaaaactgacacttagttaccccatgcaaaatacgcag
gaaaacagtgaaaatcaagcctcgccgtactttagacaattagcccaagcactgcaattg
acacctgctacttgggcaccggctgggttggggacatctctaaaagcagttctgggtagt
ccgcgggccatgctcagtgattttgttcgcgcggctggtgaagctcagcatcagaaattg
cctttgagtcgaagttggcaaggcgttttggccagtctcaaacaaaccaagctggcaccg
ttagctcagaagctagcaggcagtttgacctatcaaaataaccctggacgtcttgatccg
acattagcagtccaattgtacggtcgggacatgaatgtctcggtatcgcgattagagacg
tattatcgtaatcagtttgaatactttttgaagtatggtttgcttttacagccgcgacct
gaatttgagttatcgccagccgatactggtagtcttttccatgcggtgctggatcaatat
ctgactcagttgcgcgacgccggccagacattggccgatgtcaccgcggcagatgtcgcg
gcggcggtcccgccattagtcgcggctatcacgaagcgcccgggttatgaaattcttggc
agtacccatcggatggcttatttgacgagtcgcttaagtcggttattgatccaagtgctg
acgaacatgcgccagcagcaacgccggaccgggttccgtccgatgcgcactgagttgcag
tttggccaaattggggataccaggggcttacctggcttgtcttggccgctgccgcatggt
ggtcgcgttaatgtacgcggcaaaattgaccgactagatgtctatcgtgaatcagatgcg
cagcgatttatggttgttgattacaagagcacgcaacatcggttcgatgacagtgacgcg
tactatggcattgccttacagatgttaacgtatgttgaagcaatggcaaatgtcccagct
gatccgccatttgtgccagccggagcactgtattttcacttacaagatcctaagttcaaa
ttcagtaccgatcttgacctcgatattgatcgactaaaagcttttaaatatctaggtttc
ttggtagctaaagatggggcagacttggcggcggtagacaaaaccatttcagcagaaacc
ggtggacgcagcatgatggtgccacttggttttaaaaaagacggtgcctttaattataat
cagtcaaacattctgacaccagaagatctaagtgcctatcttttgcacaatcaggcattg
attattgatgctgccagtcggattttagccggggatatcgctttggcgccgtttcaatat
ggacaggaatcgaccgttatcagcaacagcgattatcaaagtattatgctgttcgatccg
gcaaccgggtttgatcattacaatcatgtgccaaagttgaaacgcaaagaggtgcttggc
cgcgtcacaactgatcccacacaaattccgcatcatcgtcaggaggattcgcaagcatga
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