Lacticaseibacillus paracasei BD-II: LCBD_1840
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Entry
LCBD_1840 CDS
T01955
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCBD_1840 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_1840 (xseA)
Enzymes [BR:
lcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LCBD_1840 (xseA)
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LCBD_1840 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
ALIX_LYPXL_bnd
DUF5984
Peptidase_C65
HROB
Phasin
Motif
Other DBs
NCBI-ProteinID:
AEA57336
UniProt:
A0A422ML61
LinkDB
All DBs
Position
complement(1790260..1791609)
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AA seq
449 aa
AA seq
DB search
MVDASQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRVGNQYFSLKDDHAKIGAL
MFRNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKL
AAEGLFDRNQRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAA
DSLVKRLNQIKTIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVGHETDT
TITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRVQRSAQ
SVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLREADHRLAMAASQLDGRQLFIRLVNLQ
RQVTGDRHRLDQAMRGLVKTKRQAFASAVSGLDHLSPLKILGRGFAYVTDEQGQMLKSLS
DYELDQDIHIHVADGQVGAHVTTKEKTHG
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgccagtcaatatttaagcgtcacggcactcactcaatatctcaaacgcaaa
tttgatgcggacccttaccttgccaaagtctatctgacgggtgaaatttccaattatcgc
aaacgtgtaggtaatcagtatttctcactcaaagacgatcacgccaaaatcggtgcgctg
atgtttcgtaatgccttcagcaaggttcaatttgaccttgaggaaggtatgaaagtccta
gttgttgggcgggtcagtttatatgaacctagcggcgaatatcgtttaattgtcgaacat
ctcgaaccagatggtgtgggtgcgctttatcaagcttttgagcaactgaagaaaaagttg
gcggctgaagggctatttgaccgcaaccaacgaccactgccactctttcccaaacgggtg
gcagttgtgaccagcccaagtggtgccgtcattcaagatatcatgacgacggtcgcacgg
cgctatccgattttgcaattaacgctgttcccagcagttgtccaaggcgatcaagccgcc
gattcactggtgaaacgattaaaccagattaaaacaataggtggattcgatgctgtgatc
attggccgcggtggtggttcaattgaagatctttggccttttaacgaggaaaaagttgcg
cgcgcattggtcgacatgccgatgccggttgtcagctcagtggggcatgaaaccgataca
accattaccgattttattgccgatcgacgggcggcaacgccaactgcggcggcggaaatt
gtaacgcctgtgacattgattgatgcgcttaatcgaatttctgaagatcgggtgcgactg
gtcaatgccatgcataatcggctcaaaaatgccgcgattcgagtgcagcgttctgcacaa
agtgttgtgttgacgcaaccggatcgactttatgatcaatacgttcagcgagtcgatcaa
tttcaacaacggctacaacagagtatgcataatcgcctgcgcgaggctgatcatcgtttg
gcaatggcagcttcccaattggatggccggcaactgtttatccgattggtcaatttgcag
cggcaagtgactggggatcgtcatcgcttggatcaagcgatgcgcggtttggtgaaaact
aagcgtcaggcatttgctagtgccgtgagtggccttgatcacctaagtccgttaaaaatc
ttgggccgcggatttgcttacgtgaccgatgaacaaggtcagatgctgaaaagtctaagt
gactacgagctagatcaagatattcatattcacgtggctgatggacaagtcggcgcacac
gtcaccacaaaggagaaaacacatggctga
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