Lacticaseibacillus paracasei BD-II: LCBD_1855
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Entry
LCBD_1855 CDS
T01955
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs00330
Arginine and proline metabolism
lcs00480
Glutathione metabolism
lcs01100
Metabolic pathways
lcs01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LCBD_1855
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LCBD_1855
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LCBD_1855
Enzymes [BR:
lcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LCBD_1855
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
Beta_elim_lyase
Aminotran_5
Mitoc_L55
Motif
Other DBs
NCBI-ProteinID:
AEA57351
UniProt:
A0AB36XFD7
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All DBs
Position
1803183..1805273
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AA seq
696 aa
AA seq
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MHLYIGYSEKVAARILPTNWRCLTAAPLAAFGAAIIDASDTATLTQLVASQLPLPTFIIG
QIPISHTGQLTVTNIDTLNTATMAQITAAAQAYEQTMVPAFIRDLLDYAKADPTSFATPG
HHSGHYDDLAPAGYLLHQAYGPSFFASDTSDVVTSLGDMLTHGGTPLAAEEATAQLYHAD
ETYFVTNGTTGSNNIVASALLTPGDLVLFDRNNHKSFYNAALVQNDARPVYLDTLRTKRG
LIGPIDLQNLTHESLRQMAVAVAPEKAHQSRPFRLTILELETFDGIVPNVRQLIDLFGPL
TDYIVFDAAWGGYEPFTPAMTPMDPLQVPLGPTDPGIIVTQSVHKQQSGFGQASQIHKKD
AHIKGQARYVGHEQFNHAYLKHVTTSYNYPLYASLVANTAINQGARGQKIWQDAVRAALV
FRRSLNDSRLFSAYEPPELTTLPADQAIQTARAWSMTPQAAWHQLAGLQPDQAFLDPGKV
TVLLPDTAAFGISGWLVDRYLLDHGIIPEKADLNSLLFLVTPGAARTDWQRLRQVLAQFE
ADYFANKTVAESLPKLVAETDEAYAHQTLRELGQTMSDFFREAHLAEQQRDLFTNTNAIP
TAMTPQAADRYFVRGQIDTIPLEQATGRIAVDGALPYPPGIFVVVPGERWRPEAISYFQT
LFEGIRHFPGFTPEIQGVIARAGGQPYVHVVHEQLS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatatatcggctactcagaaaaagtagcagcaaggatactgcccaccaattgg
cgttgtttaactgcggcaccgttagctgcctttggcgcagcaatcatcgatgcctctgac
actgcaacgctcactcagcttgtggccagccaattacccttaccaacttttatcatcggc
cagataccaatcagtcacactggtcagctgacagtcaccaacatcgatacacttaatacc
gcaacgatggctcagattactgctgctgcacaagcttatgagcaaaccatggtaccagca
ttcattcgtgacttactggactatgcgaaggcggacccaaccagctttgcaactcctggc
caccacagcggtcactacgacgacttagcaccagcaggttacttacttcatcaggcttac
ggcccatctttcttcgctagcgataccagcgatgtcgtcacttctttgggcgatatgtta
acacatgggggcaccccgctagctgccgaagaagcgaccgcgcagttatatcatgccgat
gaaacttattttgtgaccaacggcacgactggatcgaataacattgtggcaagtgcattg
ctcacgccaggcgatttggttttattcgatcggaataaccacaaatctttttataacgcg
gcactcgttcaaaatgatgcccgcccggtttatttggatacacttcgaacgaaacgtggg
ttgattggtccgatcgatttacagaatctaacccatgaaagtctgcgacaaatggcggta
gcggtggctcccgaaaaggcacatcaatcgcggccatttcgactgacaattcttgaacta
gaaacctttgatggcattgtgccaaatgtccgtcagttaatcgatctttttgggccttta
accgactacattgttttcgatgctgcctggggtggttatgagccgtttactccagcaatg
acgcccatggatcccctgcaggtaccgcttgggccgactgaccctggtatcatcgtcacc
caaagtgtccacaaacagcaatccgggtttggccaggcatcacagattcataaaaaagat
gcccatattaagggacaagcgcgatatgtcggtcacgaacagttcaaccacgcgtactta
aaacatgttacgaccagctacaattatccgctttacgcgtcattagtcgccaacactgcc
attaatcaaggcgctcgcggacaaaaaatctggcaagatgccgttcgagcagcactcgtc
tttcgccgctcgctcaacgattcgcgactcttttctgcttacgaaccacctgagttgaca
actttgcctgctgatcaggccattcagactgctagggcttggtccatgacaccacaagct
gcatggcatcaactcgcaggccttcaacctgatcaagcatttcttgatccaggtaaagtg
accgtgctattacctgacacagccgcatttggcatcagcggttggttagtagatcgttat
ttacttgaccacggcattattccggaaaaagccgacctaaatagcctgctttttttagtg
acgccgggggccgctcgaacagactggcaacgattgcgccaagtgttagcccagtttgaa
gccgattattttgcaaataaaaccgttgctgaaagtttgccaaaattagtcgctgaaact
gacgaggcgtatgcacatcaaacattacgcgagctaggtcagaccatgtcggactttttc
cgagaagcgcacctagctgagcaacaacgtgacttgtttaccaacaccaacgccatcccc
actgccatgaccccgcaagccgccgatcgttattttgttcgcggtcaaattgacaccatc
cctctggagcaagccacgggccgtatcgcagtcgacggcgcgctgccctatccgcccgga
atctttgtggttgtccctggcgaacgctggcgaccggaagcgatcagttactttcaaaca
ctttttgaaggtatacggcacttccccggctttaccccagaaatccaaggcgttatcgct
cgtgcaggtggtcagccatatgttcatgttgtccatgaacaactttcatag
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